Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm44938-201ENSMUST00000208614 427 ntBASIC1.6□□□□□ -2.15
Trav12-3A0A075B648 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.6□□□□□ -2.15
Trav12-3A0A075B648 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.6□□□□□ -2.15
Trav12-3A0A075B648 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.6□□□□□ -2.15
Trav12-3A0A075B648 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trav12-3A0A075B648 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Trav12-3A0A075B648 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm15560-201ENSMUST00000117107 643 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm14881-201ENSMUST00000120366 372 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm12779-201ENSMUST00000121496 143 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm14530-201ENSMUST00000122391 333 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm23212-201ENSMUST00000122718 60 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm25454-201ENSMUST00000157947 315 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Mir1947-201ENSMUST00000158235 85 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm25368-201ENSMUST00000158847 131 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm24315-201ENSMUST00000177835 127 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm25020-201ENSMUST00000178071 107 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm24862-201ENSMUST00000179103 79 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm23310-201ENSMUST00000179105 79 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm25461-201ENSMUST00000179293 79 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm20819-201ENSMUST00000191091 925 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm45513-201ENSMUST00000210228 376 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm7214-201ENSMUST00000222428 272 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm25586-201ENSMUST00000082499 112 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm22806-201ENSMUST00000082738 136 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm23093-201ENSMUST00000083450 102 ntBASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Trav12-3A0A075B648 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Trav12-3A0A075B648 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Trav12-3A0A075B648 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm22370-201ENSMUST00000102422 83 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm24670-201ENSMUST00000104154 132 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm12787-201ENSMUST00000119234 396 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm24937-201ENSMUST00000122597 134 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm22322-201ENSMUST00000157151 111 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm24783-201ENSMUST00000157639 100 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm23381-201ENSMUST00000157676 94 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm25711-201ENSMUST00000158633 128 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm25488-201ENSMUST00000158728 118 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm24418-201ENSMUST00000177597 79 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm24639-201ENSMUST00000178518 79 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm23076-201ENSMUST00000179082 79 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm25077-201ENSMUST00000179157 79 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm29231-201ENSMUST00000179850 319 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm28860-201ENSMUST00000188103 313 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm28113-201ENSMUST00000188280 229 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm6445-201ENSMUST00000189515 1112 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Trbv18-201ENSMUST00000194256 294 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm43083-201ENSMUST00000199594 476 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Gm44594-201ENSMUST00000208982 407 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav12-3A0A075B648 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm25169-201ENSMUST00000104190 129 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm8858-201ENSMUST00000118259 342 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm12646-201ENSMUST00000119144 238 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm12458-201ENSMUST00000119387 495 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm7363-201ENSMUST00000119883 399 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm12304-201ENSMUST00000120312 385 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm11882-201ENSMUST00000121463 506 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm22037-201ENSMUST00000157280 296 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm22257-201ENSMUST00000158687 301 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm24885-201ENSMUST00000158783 270 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm25162-201ENSMUST00000158906 159 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm15946-201ENSMUST00000160654 423 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms