Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.39□□□□□ -2.03
H2afb2S4R1M3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
H2afb2S4R1M3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
H2afb2S4R1M3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26504-201ENSMUST00000102033 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm22752-201ENSMUST00000102083 109 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Mir344c-201ENSMUST00000103919 92 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm13475-201ENSMUST00000119290 234 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm12443-201ENSMUST00000122308 323 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm14333-201ENSMUST00000130484 264 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm25476-201ENSMUST00000175125 185 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26502-201ENSMUST00000177732 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm25350-201ENSMUST00000177849 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm23446-201ENSMUST00000177977 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26201-201ENSMUST00000178047 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm24711-201ENSMUST00000178062 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm24609-201ENSMUST00000178166 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm23265-201ENSMUST00000178321 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm22812-201ENSMUST00000178329 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26246-201ENSMUST00000178388 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm25155-201ENSMUST00000178450 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm24760-201ENSMUST00000178530 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm22285-201ENSMUST00000178576 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm22417-201ENSMUST00000178656 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26270-201ENSMUST00000178690 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm23313-201ENSMUST00000178931 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm23089-201ENSMUST00000178947 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm24153-201ENSMUST00000179280 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm25597-201ENSMUST00000179388 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm25816-201ENSMUST00000179764 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26188-201ENSMUST00000179963 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm26433-201ENSMUST00000180227 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm22128-201ENSMUST00000180346 94 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm27490-201ENSMUST00000184754 128 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm28650-201ENSMUST00000188413 411 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm43367-201ENSMUST00000199986 625 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm44041-201ENSMUST00000203678 396 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm5001-201ENSMUST00000204361 331 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm44520-201ENSMUST00000205447 802 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm18854-201ENSMUST00000211196 329 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.38□□□□□ -2.03
H2afb2S4R1M3 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm24122-201ENSMUST00000104107 132 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm25808-201ENSMUST00000122784 284 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm14364-201ENSMUST00000129209 267 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm16354-201ENSMUST00000155376 150 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm23332-201ENSMUST00000157424 275 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm25866-201ENSMUST00000158245 112 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm8207-201ENSMUST00000171204 502 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Mir3076-201ENSMUST00000175415 60 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Mir6338-201ENSMUST00000183389 109 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Mir6916-201ENSMUST00000184514 63 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm7654-201ENSMUST00000186738 683 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm37455-201ENSMUST00000191993 529 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm43550-201ENSMUST00000200597 303 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm25135-201ENSMUST00000082648 143 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm25856-201ENSMUST00000082786 75 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Gm10343-201ENSMUST00000096279 348 ntBASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
H2afb2S4R1M3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms