Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Prpf40aQ9R1C7 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.63□□□□□ -1.67
Prpf40aQ9R1C7 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.63□□□□□ -1.67
Prpf40aQ9R1C7 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Prpf40aQ9R1C7 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Prpf40aQ9R1C7 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm12934-201ENSMUST00000119221 343 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm25543-201ENSMUST00000122678 312 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm22277-201ENSMUST00000157204 277 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm23585-201ENSMUST00000157656 102 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Mir1967-201ENSMUST00000157789 82 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm22156-201ENSMUST00000158409 141 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm29104-201ENSMUST00000186304 222 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm43193-201ENSMUST00000197732 441 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm43604-201ENSMUST00000199799 705 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm36189-201ENSMUST00000204113 523 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm19908-201ENSMUST00000204684 391 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm44520-201ENSMUST00000205447 802 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm26495-201ENSMUST00000083152 137 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.62□□□□□ -1.67
Prpf40aQ9R1C7 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm14803-201ENSMUST00000117163 361 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm13355-201ENSMUST00000117996 317 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm23789-201ENSMUST00000122536 301 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm27285-201ENSMUST00000183875 127 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm27761-201ENSMUST00000184091 131 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm46993-201ENSMUST00000220708 259 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Gm23875-201ENSMUST00000083711 318 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Prpf40aQ9R1C7 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm24788-201ENSMUST00000104283 156 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm26019-201ENSMUST00000104407 119 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm23990-201ENSMUST00000117031 117 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm25913-201ENSMUST00000157617 135 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm25605-201ENSMUST00000158364 124 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm17159-201ENSMUST00000169043 482 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm17166-201ENSMUST00000172006 431 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm27220-201ENSMUST00000183453 262 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm27718-201ENSMUST00000183721 86 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm28500-201ENSMUST00000190286 151 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Mir5121-201ENSMUST00000198528 74 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm24966-201ENSMUST00000082443 79 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Snord21-201ENSMUST00000082519 94 ntBASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Prpf40aQ9R1C7 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Mir466p-201ENSMUST00000103925 89 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Mir1b-201ENSMUST00000117012 122 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm14775-201ENSMUST00000122089 310 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm22225-201ENSMUST00000157358 278 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm22767-201ENSMUST00000158365 165 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm22531-201ENSMUST00000158819 140 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm23966-201ENSMUST00000179823 107 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm28825-201ENSMUST00000186233 238 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm43649-201ENSMUST00000196596 391 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm18429-201ENSMUST00000198707 421 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm43220-201ENSMUST00000199299 282 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm43680-201ENSMUST00000199466 340 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm45006-201ENSMUST00000206078 690 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Gm45778-201ENSMUST00000211959 153 ntBASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.59□□□□□ -1.67
Prpf40aQ9R1C7 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms