Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm3102-201ENSMUST00000164236 489 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Mir6411-201ENSMUST00000183556 108 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Mir6352-201ENSMUST00000184495 116 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm37684-201ENSMUST00000192779 355 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm24622-201ENSMUST00000082619 162 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm22265-201ENSMUST00000082947 116 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm23391-201ENSMUST00000157579 104 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm24601-201ENSMUST00000157970 143 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm21744-201ENSMUST00000178403 662 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29231-201ENSMUST00000179850 319 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm21171-201ENSMUST00000180048 673 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Mir6370-201ENSMUST00000183510 120 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29413-201ENSMUST00000186019 880 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm18667-201ENSMUST00000186523 484 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29603-201ENSMUST00000186792 334 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm28700-201ENSMUST00000187614 579 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29639-201ENSMUST00000188375 580 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm28843-201ENSMUST00000189198 678 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm29546-201ENSMUST00000191171 678 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm44324-201ENSMUST00000198517 135 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm45071-201ENSMUST00000205353 571 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm10360-201ENSMUST00000097219 272 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.21□□□□□ -2.22
Trem3Q9JKE1 Gm11065-201ENSMUST00000111462 228 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm25625-201ENSMUST00000157221 96 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm22315-201ENSMUST00000158010 143 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm24858-201ENSMUST00000158058 323 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Snord11-201ENSMUST00000158468 84 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm23181-201ENSMUST00000158685 110 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm17038-201ENSMUST00000166586 494 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm21737-201ENSMUST00000178112 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm21726-201ENSMUST00000179654 392 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm21729-201ENSMUST00000180058 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm21853-201ENSMUST00000180071 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm20901-201ENSMUST00000180177 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Mir6399-201ENSMUST00000184050 84 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm29073-201ENSMUST00000185563 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm28453-203ENSMUST00000187041 189 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm29495-201ENSMUST00000189319 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm28090-201ENSMUST00000189458 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm21647-201ENSMUST00000189755 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm29165-201ENSMUST00000190655 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm29211-201ENSMUST00000191470 664 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm36891-201ENSMUST00000191995 655 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm37081-201ENSMUST00000192034 196 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Trbv7-201ENSMUST00000193339 402 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm42807-201ENSMUST00000200141 329 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm44844-201ENSMUST00000207242 336 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.2□□□□□ -2.22
Trem3Q9JKE1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trem3Q9JKE1 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm12045-201ENSMUST00000122122 573 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm23043-201ENSMUST00000157890 109 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm24053-201ENSMUST00000158620 105 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Mir669n-201ENSMUST00000158636 54 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm7953-201ENSMUST00000168278 469 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Mir5118-201ENSMUST00000175551 67 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Mir7068-201ENSMUST00000183439 74 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm27861-201ENSMUST00000183920 214 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm23370-202ENSMUST00000197008 129 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm44656-201ENSMUST00000208428 490 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm45730-201ENSMUST00000212560 395 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm25257-201ENSMUST00000083907 110 ntBASIC1.19□□□□□ -2.22
Trem3Q9JKE1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trem3Q9JKE1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm11813-201ENSMUST00000118586 291 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm22217-201ENSMUST00000157556 313 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms