Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm43472-201ENSMUST00000200175 154 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm6842-201ENSMUST00000211361 390 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Mir137-201ENSMUST00000083635 73 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Mir743b-201ENSMUST00000104751 77 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm14013-201ENSMUST00000119006 270 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm22560-201ENSMUST00000157332 120 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm24213-201ENSMUST00000158255 258 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm17166-201ENSMUST00000172006 431 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Mir3106-201ENSMUST00000175401 82 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm29231-201ENSMUST00000179850 319 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm29352-201ENSMUST00000188054 544 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm28661-201ENSMUST00000188231 681 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm34015-201ENSMUST00000194908 451 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm43505-201ENSMUST00000200579 139 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.23□□□□□ -1.89
Trim54Q9ERP3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm12071-201ENSMUST00000121968 469 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm24577-201ENSMUST00000158580 63 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm15900-201ENSMUST00000161584 342 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm37428-201ENSMUST00000193886 137 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm45730-201ENSMUST00000212560 395 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Mir184-201ENSMUST00000083662 69 ntBASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
Trim54Q9ERP3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.21□□□□□ -1.89
Trim54Q9ERP3 Gm12793-201ENSMUST00000119268 292 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm11363-201ENSMUST00000121672 548 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm25827-201ENSMUST00000157089 107 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm24691-201ENSMUST00000157762 140 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm17117-201ENSMUST00000163665 299 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Mir5099-201ENSMUST00000175257 74 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm27624-201ENSMUST00000185047 177 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm44870-201ENSMUST00000207291 357 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm45344-201ENSMUST00000211610 341 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Gm25475-201ENSMUST00000082825 180 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
Trim54Q9ERP3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.21□□□□□ -1.9
Trim54Q9ERP3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm23911-201ENSMUST00000104596 134 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm14593-201ENSMUST00000119948 294 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm14629-201ENSMUST00000122428 144 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm23000-201ENSMUST00000157083 139 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm22141-201ENSMUST00000157403 277 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm24191-201ENSMUST00000157977 122 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm24192-201ENSMUST00000157978 145 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm20656-201ENSMUST00000176925 518 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm27532-201ENSMUST00000183726 113 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm27505-201ENSMUST00000185071 110 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm19177-201ENSMUST00000204520 613 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.2□□□□□ -1.9
Trim54Q9ERP3 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 173.8 ms