Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm19932-201ENSMUST00000177033 313 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm5900-201ENSMUST00000179862 375 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm27722-201ENSMUST00000183908 76 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Mir7021-201ENSMUST00000197026 63 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm22061-201ENSMUST00000082557 107 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm13728-201ENSMUST00000117471 400 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm12646-201ENSMUST00000119144 238 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm22227-201ENSMUST00000157356 259 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm25220-201ENSMUST00000157546 95 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm22098-201ENSMUST00000157930 85 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm5277-201ENSMUST00000164923 556 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Mir3103-201ENSMUST00000175474 67 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm24572-201ENSMUST00000175505 88 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm25194-201ENSMUST00000177987 79 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm27991-201ENSMUST00000184804 137 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm5329-201ENSMUST00000186898 463 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm38213-201ENSMUST00000193203 173 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm44324-201ENSMUST00000198517 135 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm44181-201ENSMUST00000203106 483 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm18991-201ENSMUST00000209225 746 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm45754-201ENSMUST00000212380 279 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm46994-201ENSMUST00000221523 219 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm5955-201ENSMUST00000222712 219 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm25788-201ENSMUST00000082721 131 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Mir350-201ENSMUST00000083639 99 ntBASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Lima1Q9ERG0 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm16428-201ENSMUST00000121193 723 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm27959-201ENSMUST00000185172 111 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm44392-201ENSMUST00000196758 115 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm44754-201ENSMUST00000208155 400 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm23040-201ENSMUST00000083869 163 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Mir465-201ENSMUST00000093563 74 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.71□□□□□ -2.14
Lima1Q9ERG0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm14868-201ENSMUST00000117840 216 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm12191-201ENSMUST00000118307 348 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm2768-201ENSMUST00000121062 250 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm12926-201ENSMUST00000121158 409 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm24056-201ENSMUST00000158617 146 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm22666-201ENSMUST00000158717 164 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Mir7678-201ENSMUST00000185076 71 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm22247-201ENSMUST00000082476 131 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Gm25131-201ENSMUST00000082653 151 ntBASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
Lima1Q9ERG0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm12814-201ENSMUST00000117091 846 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm14049-201ENSMUST00000121009 636 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm22264-201ENSMUST00000178200 107 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm28825-201ENSMUST00000186233 238 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm29429-201ENSMUST00000187071 121 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm38044-201ENSMUST00000192964 487 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm37319-201ENSMUST00000193500 636 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm44182-201ENSMUST00000204052 115 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm44050-201ENSMUST00000204263 527 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms