Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Mir1954-201ENSMUST00000175595 86 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm37037-201ENSMUST00000194475 424 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm37417-201ENSMUST00000195257 454 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm44476-201ENSMUST00000196225 91 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm18982-201ENSMUST00000198118 529 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Mir3069-201ENSMUST00000198802 65 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm22507-201ENSMUST00000082773 160 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm22866-201ENSMUST00000083947 177 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm24430-201ENSMUST00000104077 104 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm14918-201ENSMUST00000118153 268 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm13085-201ENSMUST00000118356 171 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm7209-201ENSMUST00000122339 333 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm24517-201ENSMUST00000122560 107 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm24198-201ENSMUST00000157812 108 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm26406-201ENSMUST00000158503 124 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm24100-201ENSMUST00000178592 79 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm25156-201ENSMUST00000179809 79 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm27698-201ENSMUST00000184060 249 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm38044-201ENSMUST00000192964 487 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm46994-201ENSMUST00000221523 219 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm5955-201ENSMUST00000222712 219 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Gm24707-201ENSMUST00000082812 107 ntBASIC2.52□□□□□ -2.01
Scn4aQ9ER60 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn4aQ9ER60 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Snord71-201ENSMUST00000104361 85 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm27245-201ENSMUST00000184385 376 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Mir6371-201ENSMUST00000184470 111 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm27755-201ENSMUST00000184623 132 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm28926-201ENSMUST00000191063 680 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm44449-201ENSMUST00000203610 153 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.51□□□□□ -2.01
Scn4aQ9ER60 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm22810-201ENSMUST00000082741 158 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Gm25124-201ENSMUST00000083345 164 ntBASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Scn4aQ9ER60 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm14020-201ENSMUST00000118165 662 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm11813-201ENSMUST00000118586 291 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm11819-201ENSMUST00000122192 372 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm22236-201ENSMUST00000157093 106 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm23981-201ENSMUST00000157136 106 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm25637-201ENSMUST00000157529 107 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm16289-201ENSMUST00000162079 183 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm36966-201ENSMUST00000192217 413 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm45687-201ENSMUST00000209454 155 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Scn4aQ9ER60 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Mir19a-201ENSMUST00000083482 82 ntBASIC2.5□□□□□ -2.01
Scn4aQ9ER60 Gm15223-201ENSMUST00000120989 826 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm13210-201ENSMUST00000121483 273 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm15065-201ENSMUST00000121699 273 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm14253-201ENSMUST00000122112 639 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm9593-201ENSMUST00000166034 469 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm27582-201ENSMUST00000184084 126 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm44387-201ENSMUST00000196298 145 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm44050-201ENSMUST00000204263 527 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Snora69-201ENSMUST00000083708 131 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Scn4aQ9ER60 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms