Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Gm43228-201ENSMUST00000200735 264 ntBASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Gm45207-201ENSMUST00000207469 145 ntBASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Gm24919-201ENSMUST00000083020 106 ntBASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm22217-201ENSMUST00000157556 313 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm37029-201ENSMUST00000195773 239 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm44794-201ENSMUST00000206550 411 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm9318-201ENSMUST00000222444 438 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm21937-201ENSMUST00000222825 218 ntBASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Cpsf1Q9EPU4 Gm37761-201ENSMUST00000194989 2098 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm8988-201ENSMUST00000155015 1240 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm7858-201ENSMUST00000190177 622 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm37997-201ENSMUST00000193515 267 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm43250-201ENSMUST00000196536 273 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm42672-201ENSMUST00000197821 352 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm44301-201ENSMUST00000200362 143 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 AC134254.5-201ENSMUST00000223436 400 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
Cpsf1Q9EPU4 Gm45262-201ENSMUST00000209917 1463 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm11367-201ENSMUST00000117802 120 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm24911-201ENSMUST00000157292 136 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm9830-201ENSMUST00000178509 357 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm44274-201ENSMUST00000203417 256 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm44295-201ENSMUST00000203805 437 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm18854-201ENSMUST00000211196 329 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 AC115047.1-201ENSMUST00000213795 322 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 AC132954.1-201ENSMUST00000221017 342 ntBASIC0.94□□□□□ -2.26
Cpsf1Q9EPU4 Gm11862-201ENSMUST00000119678 659 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm14903-201ENSMUST00000122435 537 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm21754-201ENSMUST00000177550 479 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm25936-201ENSMUST00000179952 114 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm24020-201ENSMUST00000180156 108 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 AC125531.1-201ENSMUST00000219849 221 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Ear14-201ENSMUST00000049559 468 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm42635-201ENSMUST00000200266 2571 ntBASIC0.93□□□□□ -2.26
Cpsf1Q9EPU4 Gm24555-201ENSMUST00000104548 124 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Gm4916-201ENSMUST00000126139 642 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Snora81-201ENSMUST00000157310 178 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Gm34701-202ENSMUST00000204685 360 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 AC167977.1-201ENSMUST00000221384 234 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Gm25788-201ENSMUST00000082721 131 ntBASIC0.92□□□□□ -2.26
Cpsf1Q9EPU4 Gm15382-201ENSMUST00000118011 537 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Gm16038-201ENSMUST00000159317 193 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Gm38044-201ENSMUST00000192964 487 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Gm38113-201ENSMUST00000193704 201 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Gm43286-201ENSMUST00000197420 424 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Gm24412-201ENSMUST00000083426 109 ntBASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Cpsf1Q9EPU4 Gm15029-201ENSMUST00000119742 199 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm14577-201ENSMUST00000121134 256 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm23605-201ENSMUST00000157255 127 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm22537-201ENSMUST00000158172 199 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm27761-201ENSMUST00000184091 131 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm37934-201ENSMUST00000192902 402 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm43708-201ENSMUST00000198857 961 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm45316-201ENSMUST00000210128 162 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm4921-201ENSMUST00000219804 992 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Mir107-201ENSMUST00000083660 87 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Gm24258-201ENSMUST00000083739 133 ntBASIC0.9□□□□□ -2.26
Cpsf1Q9EPU4 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.9□□□□□ -2.27
Cpsf1Q9EPU4 Gm24431-201ENSMUST00000104073 66 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm12368-201ENSMUST00000122251 434 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm23172-201ENSMUST00000157160 124 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm16162-201ENSMUST00000162296 297 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm18691-201ENSMUST00000203593 872 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 CT010480.5-201ENSMUST00000225026 217 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
Cpsf1Q9EPU4 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms