Protein–RNA interactions for Protein: Q9DAL3

Ccdc54, Coiled-coil domain-containing protein 54, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54Q9DAL3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc54Q9DAL3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.22□□□□□ -2.05
Ccdc54Q9DAL3 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.22□□□□□ -2.05
Ccdc54Q9DAL3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc54Q9DAL3 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.21□□□□□ -2.05
Ccdc54Q9DAL3 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Mir1193-201ENSMUST00000116761 121 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm14588-201ENSMUST00000119895 172 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm14593-201ENSMUST00000119948 294 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm11785-201ENSMUST00000120165 601 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm14392-201ENSMUST00000120332 401 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm14413-201ENSMUST00000122158 408 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm24019-201ENSMUST00000178620 107 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm26243-201ENSMUST00000179260 107 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm27236-201ENSMUST00000184147 442 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm28927-201ENSMUST00000191528 272 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm44478-201ENSMUST00000204875 114 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm19441-201ENSMUST00000221545 330 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm4945-201ENSMUST00000075152 453 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm10025-201ENSMUST00000079568 372 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm23296-201ENSMUST00000082555 107 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm24859-201ENSMUST00000082729 107 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc54Q9DAL3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm12697-201ENSMUST00000118008 667 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm23429-201ENSMUST00000122486 149 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm24498-201ENSMUST00000158445 102 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm16232-201ENSMUST00000162856 167 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm6788-201ENSMUST00000166459 270 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm27313-201ENSMUST00000183500 142 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm27249-201ENSMUST00000185049 328 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm37658-201ENSMUST00000192672 315 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Trbv24-201ENSMUST00000194614 347 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm9236-201ENSMUST00000196892 587 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm42622-201ENSMUST00000197229 355 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm43600-201ENSMUST00000202134 223 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm44142-201ENSMUST00000203358 311 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm44526-201ENSMUST00000204664 121 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm44128-201ENSMUST00000204909 219 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm22249-201ENSMUST00000082485 136 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Rny3-201ENSMUST00000083011 102 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm23454-201ENSMUST00000083332 133 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm23093-201ENSMUST00000083450 102 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Mir208a-201ENSMUST00000083498 83 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc54Q9DAL3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm13876-201ENSMUST00000118451 261 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm15030-201ENSMUST00000119804 484 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm16021-201ENSMUST00000121176 219 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm26186-201ENSMUST00000157689 125 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm25373-201ENSMUST00000158156 115 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm15914-201ENSMUST00000161922 309 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Mir3965-201ENSMUST00000175570 69 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Mir6338-201ENSMUST00000183389 109 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Mir6402-201ENSMUST00000183406 80 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm28951-201ENSMUST00000190742 313 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm32033-201ENSMUST00000193483 339 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm44041-201ENSMUST00000203678 396 ntBASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc54Q9DAL3 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms