Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ddx56Q9D0R4 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm24338-201ENSMUST00000104205 127 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm14670-201ENSMUST00000117327 337 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm13457-201ENSMUST00000117885 267 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm13692-201ENSMUST00000120774 371 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm15466-201ENSMUST00000122299 333 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm24481-201ENSMUST00000157210 102 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm25121-201ENSMUST00000179846 79 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Mir6370-201ENSMUST00000183510 120 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Mir7667-201ENSMUST00000183866 63 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Mir6951-201ENSMUST00000183910 75 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm44844-201ENSMUST00000207242 336 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm45375-201ENSMUST00000210338 280 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 AC102369.1-201ENSMUST00000218415 373 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm4945-201ENSMUST00000075152 453 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm25801-201ENSMUST00000082638 106 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm26327-201ENSMUST00000093724 111 ntBASIC3.59□□□□□ -1.83
Ddx56Q9D0R4 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.59□□□□□ -1.84
Ddx56Q9D0R4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.59□□□□□ -1.84
Ddx56Q9D0R4 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Ddx56Q9D0R4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ddx56Q9D0R4 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Ddx56Q9D0R4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm13329-201ENSMUST00000117063 265 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm24499-201ENSMUST00000158446 104 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm27773-201ENSMUST00000184087 78 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm43739-201ENSMUST00000198294 307 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm9377-201ENSMUST00000207227 623 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm44927-201ENSMUST00000207573 716 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm10237-201ENSMUST00000078393 273 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx56Q9D0R4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm24792-201ENSMUST00000104286 128 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm22676-201ENSMUST00000116972 129 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm12025-201ENSMUST00000117768 144 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm25781-201ENSMUST00000122527 84 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm650-201ENSMUST00000144428 1551 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm22320-201ENSMUST00000157149 312 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm27926-201ENSMUST00000157180 66 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm24908-201ENSMUST00000157294 127 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm22654-201ENSMUST00000157874 105 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm24998-201ENSMUST00000157908 89 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm22389-201ENSMUST00000158193 301 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm5967-201ENSMUST00000172723 494 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm22853-201ENSMUST00000174974 131 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm6510-201ENSMUST00000195916 574 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm43393-201ENSMUST00000200147 194 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm42739-201ENSMUST00000200687 226 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm2189-201ENSMUST00000201419 429 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Olfr197-201ENSMUST00000080031 926 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm23736-201ENSMUST00000082553 75 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm23721-201ENSMUST00000083005 107 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms