Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm12617-201ENSMUST00000121268 381 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm17065-201ENSMUST00000165245 239 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm24810-201ENSMUST00000175317 70 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Mir5123-201ENSMUST00000177794 83 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm21893-201ENSMUST00000179119 397 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm34783-201ENSMUST00000209159 303 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm30155-201ENSMUST00000223458 339 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm23242-201ENSMUST00000083055 107 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Mir137-201ENSMUST00000083635 73 ntBASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Mir669o-201ENSMUST00000103898 96 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm22779-201ENSMUST00000104085 107 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm12871-201ENSMUST00000118758 438 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm12872-201ENSMUST00000121835 320 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm26027-201ENSMUST00000122725 268 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm14389-201ENSMUST00000140453 241 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm29231-201ENSMUST00000179850 319 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm26585-201ENSMUST00000180890 630 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm45687-201ENSMUST00000209454 155 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm23627-201ENSMUST00000082459 107 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm22502-201ENSMUST00000082488 107 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm22977-201ENSMUST00000082615 107 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm24149-201ENSMUST00000082757 107 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm23723-201ENSMUST00000082996 132 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm24043-201ENSMUST00000083108 116 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ddx28Q9CWT6 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm13475-201ENSMUST00000119290 234 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm14069-201ENSMUST00000120815 229 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm24475-201ENSMUST00000157435 143 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm25490-201ENSMUST00000158734 130 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm20651-201ENSMUST00000177219 329 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Mir6353-201ENSMUST00000183596 113 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm28000-201ENSMUST00000184380 85 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm27700-201ENSMUST00000185003 81 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm29352-201ENSMUST00000188054 544 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm18291-201ENSMUST00000190791 301 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm44476-201ENSMUST00000196225 91 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm6059-201ENSMUST00000196903 340 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm43529-201ENSMUST00000199178 412 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm43884-201ENSMUST00000204251 559 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm44519-201ENSMUST00000206486 122 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm44718-201ENSMUST00000206886 359 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm5374-201ENSMUST00000222868 657 ntBASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Ddx28Q9CWT6 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm26396-201ENSMUST00000104093 132 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm23175-201ENSMUST00000104371 132 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm12071-201ENSMUST00000121968 469 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm25945-201ENSMUST00000122484 135 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm17148-201ENSMUST00000164702 249 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm17062-201ENSMUST00000166987 461 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm21737-201ENSMUST00000178112 664 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm21815-201ENSMUST00000178213 664 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm20874-201ENSMUST00000178356 663 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm22131-201ENSMUST00000178415 94 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm20901-201ENSMUST00000180177 664 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Mir7093-201ENSMUST00000184195 101 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm28779-201ENSMUST00000189678 323 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm29553-201ENSMUST00000189692 279 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Gm21647-201ENSMUST00000189755 664 ntBASIC2.67□□□□□ -1.98
Ddx28Q9CWT6 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms