Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm44609-201ENSMUST00000207157 460 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm45791-201ENSMUST00000212908 352 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm20304-201ENSMUST00000218168 444 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm25796-201ENSMUST00000082645 163 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.65□□□□□ -1.98
Smc1aQ9CU62 Gm23744-201ENSMUST00000104231 149 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm22151-201ENSMUST00000116963 58 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm11845-201ENSMUST00000117886 327 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm15167-201ENSMUST00000121997 187 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm16355-201ENSMUST00000128606 231 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm25706-201ENSMUST00000157828 247 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm23642-201ENSMUST00000157858 258 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm22716-201ENSMUST00000177596 107 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm23619-201ENSMUST00000178411 94 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm25474-201ENSMUST00000179052 94 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm22047-201ENSMUST00000179176 94 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm28000-201ENSMUST00000184380 85 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm29429-201ENSMUST00000187071 121 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm28648-201ENSMUST00000190092 343 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm43007-201ENSMUST00000197618 291 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm44459-201ENSMUST00000203926 160 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm19140-201ENSMUST00000209790 421 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm45772-201ENSMUST00000212961 240 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm18160-201ENSMUST00000214279 827 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm23848-201ENSMUST00000083826 106 ntBASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Smc1aQ9CU62 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Mir669d-201ENSMUST00000104644 121 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm13756-201ENSMUST00000117618 222 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm12697-201ENSMUST00000118008 667 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm15536-201ENSMUST00000121411 114 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm14848-201ENSMUST00000121850 467 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm27399-201ENSMUST00000184250 78 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm25820-202ENSMUST00000197479 128 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Mir6925-201ENSMUST00000197857 70 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm2676-201ENSMUST00000207279 606 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Olfr197-201ENSMUST00000080031 926 ntBASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Smc1aQ9CU62 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm26154-201ENSMUST00000102339 96 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm14793-201ENSMUST00000118739 311 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm11358-201ENSMUST00000122310 373 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm25784-201ENSMUST00000122524 81 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm17062-201ENSMUST00000166987 461 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm25670-201ENSMUST00000178423 107 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm26239-201ENSMUST00000178842 107 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm24267-201ENSMUST00000179841 107 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm27753-201ENSMUST00000184742 203 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm5329-201ENSMUST00000186898 463 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm42647-201ENSMUST00000195939 459 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm44161-201ENSMUST00000203532 253 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm8031-201ENSMUST00000213430 626 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm17890-201ENSMUST00000221419 757 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm24292-201ENSMUST00000082888 107 ntBASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Smc1aQ9CU62 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.62□□□□□ -1.99
Smc1aQ9CU62 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smc1aQ9CU62 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.62□□□□□ -1.99
Smc1aQ9CU62 Gm22752-201ENSMUST00000102083 109 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms