Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm23068-201ENSMUST00000158239 293 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm8114-201ENSMUST00000172225 484 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm11395-201ENSMUST00000181011 499 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Mir6370-201ENSMUST00000183510 120 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm21673-201ENSMUST00000186640 436 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm29429-201ENSMUST00000187071 121 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm21135-201ENSMUST00000189023 436 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm42647-201ENSMUST00000195939 459 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Mir7215-201ENSMUST00000200383 51 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm42739-201ENSMUST00000200687 226 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm42475-201ENSMUST00000201212 295 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm29809-201ENSMUST00000218423 493 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm5374-201ENSMUST00000222868 657 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm26446-201ENSMUST00000082455 103 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm22443-201ENSMUST00000082890 107 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm23454-201ENSMUST00000083332 133 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Olfr575-201ENSMUST00000084812 957 ntBASIC1.63□□□□□ -2.15
RTRAFQ9CQE8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm22779-201ENSMUST00000104085 107 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm14709-201ENSMUST00000121225 304 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm14770-201ENSMUST00000122197 312 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm23317-201ENSMUST00000157999 129 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm25373-201ENSMUST00000158156 115 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm5277-201ENSMUST00000164923 556 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm17161-201ENSMUST00000169187 524 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm23269-201ENSMUST00000178701 107 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm23145-201ENSMUST00000178912 79 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm44212-201ENSMUST00000205016 897 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm44825-201ENSMUST00000207557 150 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm44598-201ENSMUST00000207566 150 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm24151-201ENSMUST00000082758 141 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm25124-201ENSMUST00000083345 164 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Mir301-201ENSMUST00000083655 86 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Gm23040-201ENSMUST00000083869 163 ntBASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RTRAFQ9CQE8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm13331-201ENSMUST00000117500 448 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm11352-201ENSMUST00000119264 517 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm15067-201ENSMUST00000119534 156 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm14852-201ENSMUST00000120065 647 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm14049-201ENSMUST00000121009 636 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm11849-201ENSMUST00000121293 261 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm14564-201ENSMUST00000122159 294 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm24910-201ENSMUST00000157289 272 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm25706-201ENSMUST00000157828 247 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm20660-201ENSMUST00000177515 289 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm23619-201ENSMUST00000178411 94 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm25474-201ENSMUST00000179052 94 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm22047-201ENSMUST00000179176 94 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm19140-201ENSMUST00000209790 421 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Mir300-201ENSMUST00000083485 79 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.61□□□□□ -2.15
RTRAFQ9CQE8 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms