Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.92□□□□□ -2.1
Use1Q9CQ56 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.92□□□□□ -2.1
Use1Q9CQ56 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.92□□□□□ -2.1
Use1Q9CQ56 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Use1Q9CQ56 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.92□□□□□ -2.1
Use1Q9CQ56 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Use1Q9CQ56 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Use1Q9CQ56 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Use1Q9CQ56 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Gm11352-201ENSMUST00000119264 517 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Gm9043-201ENSMUST00000119677 314 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Gm22500-201ENSMUST00000158982 99 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Gm17054-201ENSMUST00000169811 259 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.91□□□□□ -2.1
Use1Q9CQ56 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Mir301-201ENSMUST00000083655 86 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.91□□□□□ -2.1
Use1Q9CQ56 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.9□□□□□ -2.1
Use1Q9CQ56 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm24582-201ENSMUST00000103967 103 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm24274-201ENSMUST00000116787 124 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm7164-201ENSMUST00000117503 450 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm14774-201ENSMUST00000117857 536 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm25863-201ENSMUST00000158249 329 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Snord11-201ENSMUST00000158468 84 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm25658-201ENSMUST00000158472 128 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm8114-201ENSMUST00000172225 484 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm23813-201ENSMUST00000175153 77 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Mir497-201ENSMUST00000200557 84 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm25788-201ENSMUST00000082721 131 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Gm25007-201ENSMUST00000083808 133 ntBASIC1.9□□□□□ -2.11
Use1Q9CQ56 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
Use1Q9CQ56 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm24098-201ENSMUST00000102075 109 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm25381-201ENSMUST00000102078 109 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm22727-201ENSMUST00000158090 116 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm24770-201ENSMUST00000158505 92 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm25711-201ENSMUST00000158633 128 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm21885-201ENSMUST00000178891 327 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Mir6995-201ENSMUST00000183658 71 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm42805-201ENSMUST00000196158 276 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm9236-201ENSMUST00000196892 587 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm45386-201ENSMUST00000210194 218 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm22810-201ENSMUST00000082741 158 ntBASIC1.89□□□□□ -2.11
Use1Q9CQ56 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Use1Q9CQ56 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Use1Q9CQ56 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm15211-201ENSMUST00000118932 528 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm12934-201ENSMUST00000119221 343 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm24897-201ENSMUST00000179033 107 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm25361-201ENSMUST00000179358 76 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.88□□□□□ -2.11
Use1Q9CQ56 Mir6950-201ENSMUST00000184438 73 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm5116-201ENSMUST00000187732 463 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm29627-201ENSMUST00000187984 463 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm19694-201ENSMUST00000192364 505 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm38154-201ENSMUST00000195444 340 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.88□□□□□ -2.11
Use1Q9CQ56 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Use1Q9CQ56 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Use1Q9CQ56 Gm24151-201ENSMUST00000082758 141 ntBASIC1.88□□□□□ -2.11
Use1Q9CQ56 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Use1Q9CQ56 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Use1Q9CQ56 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Use1Q9CQ56 Mdga2-203ENSMUST00000113942 423 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm15714-201ENSMUST00000117168 250 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm15067-201ENSMUST00000119534 156 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm15878-201ENSMUST00000127561 306 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm26214-201ENSMUST00000158581 107 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm29216-201ENSMUST00000187117 492 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm28956-201ENSMUST00000189047 427 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm28745-201ENSMUST00000190069 305 ntBASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.87□□□□□ -2.11
Use1Q9CQ56 Gm7946-201ENSMUST00000203326 958 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms