Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm36728-201ENSMUST00000195782 665 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm43402-201ENSMUST00000197159 159 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm18252-203ENSMUST00000215855 757 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Mir706-201ENSMUST00000102262 84 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm25168-201ENSMUST00000104189 132 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14594-201ENSMUST00000118052 537 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm2003-201ENSMUST00000118537 636 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm13432-201ENSMUST00000118861 241 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14590-201ENSMUST00000118934 537 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm12507-201ENSMUST00000119155 415 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm6444-201ENSMUST00000119611 458 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm25220-201ENSMUST00000157546 95 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm24780-201ENSMUST00000157635 143 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm25334-201ENSMUST00000158036 110 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm24858-201ENSMUST00000158058 323 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm17113-201ENSMUST00000170118 171 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm4468-201ENSMUST00000170206 294 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm8207-201ENSMUST00000171204 502 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm25994-201ENSMUST00000175392 101 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14596-201ENSMUST00000180268 537 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14595-201ENSMUST00000180335 537 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm27428-201ENSMUST00000184289 110 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm42958-201ENSMUST00000197595 318 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm45439-201ENSMUST00000211723 359 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 CT030684.2-201ENSMUST00000228946 826 ntBASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ccdc28aQ8CEI3 Gm11785-201ENSMUST00000120165 601 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Mir669n-201ENSMUST00000158636 54 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm26157-201ENSMUST00000158974 126 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm22264-201ENSMUST00000178200 107 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Mir6997-201ENSMUST00000184313 71 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Snord43-201ENSMUST00000199549 108 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm19649-201ENSMUST00000201126 822 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm43955-201ENSMUST00000204332 142 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm44844-201ENSMUST00000207242 336 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm2446-201ENSMUST00000220144 772 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm22247-201ENSMUST00000082476 131 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Mir151-201ENSMUST00000083678 68 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Snord7-201ENSMUST00000083781 97 ntBASIC1.56□□□□□ -2.16
Ccdc28aQ8CEI3 Gm11854-201ENSMUST00000117839 446 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14774-201ENSMUST00000117857 536 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm6923-201ENSMUST00000118343 406 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm11219-201ENSMUST00000118565 358 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14898-201ENSMUST00000120202 645 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm23332-201ENSMUST00000157424 275 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm23391-201ENSMUST00000157579 104 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm17164-201ENSMUST00000169013 506 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm24100-201ENSMUST00000178592 79 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm26189-201ENSMUST00000179879 107 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm29754-201ENSMUST00000206269 358 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm25007-201ENSMUST00000083808 133 ntBASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Ccdc28aQ8CEI3 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm25376-201ENSMUST00000104340 133 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm12814-201ENSMUST00000117091 846 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm13355-201ENSMUST00000117996 317 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm14360-201ENSMUST00000120670 393 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm23172-201ENSMUST00000157160 124 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm23043-201ENSMUST00000157890 109 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm24348-201ENSMUST00000158710 130 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm18433-201ENSMUST00000192747 197 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm37771-201ENSMUST00000193121 265 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm37743-201ENSMUST00000194645 376 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm38268-201ENSMUST00000195813 193 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm43578-201ENSMUST00000201250 459 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm10298-201ENSMUST00000074801 265 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Gm22443-201ENSMUST00000082890 107 ntBASIC1.54□□□□□ -2.16
Ccdc28aQ8CEI3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms