Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Gm45445-201ENSMUST00000209586 232 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Gm2436-201ENSMUST00000219562 774 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Gm23404-201ENSMUST00000082543 97 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Gm25579-201ENSMUST00000083407 106 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Gm10343-201ENSMUST00000096279 348 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ccdc28bQ8CEG5 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm24792-201ENSMUST00000104286 128 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm26147-201ENSMUST00000104479 114 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm15175-201ENSMUST00000117629 132 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm14823-201ENSMUST00000117698 238 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm5937-201ENSMUST00000119715 643 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm13913-201ENSMUST00000121126 260 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm24745-201ENSMUST00000157840 85 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm20656-201ENSMUST00000176925 518 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm23862-201ENSMUST00000180342 94 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Mir6338-201ENSMUST00000183389 109 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm10105-201ENSMUST00000184601 270 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm37054-201ENSMUST00000193481 543 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm44824-201ENSMUST00000207021 229 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm17990-201ENSMUST00000211728 553 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm25411-201ENSMUST00000083760 151 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ccdc28bQ8CEG5 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm26075-201ENSMUST00000104062 121 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm11460-201ENSMUST00000118200 361 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm15799-201ENSMUST00000120899 289 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm11384-201ENSMUST00000121376 303 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm12819-201ENSMUST00000122223 629 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 DQ267100-201ENSMUST00000122600 72 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm23169-201ENSMUST00000157157 112 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm22038-201ENSMUST00000157277 242 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm24857-201ENSMUST00000158061 310 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm26041-201ENSMUST00000158148 108 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm22434-201ENSMUST00000158549 122 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm24082-201ENSMUST00000175175 83 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm23725-201ENSMUST00000177876 107 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm24168-201ENSMUST00000178825 107 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm27786-201ENSMUST00000184337 70 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm32381-201ENSMUST00000203192 476 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm44520-201ENSMUST00000205447 802 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm19786-201ENSMUST00000222589 580 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm22577-201ENSMUST00000083731 109 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Gm23345-201ENSMUST00000083817 150 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.63□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm22658-201ENSMUST00000104196 155 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm24376-201ENSMUST00000104399 127 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm12765-201ENSMUST00000117273 615 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm14852-201ENSMUST00000120065 647 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm12238-201ENSMUST00000127764 124 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm9022-202ENSMUST00000183285 483 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm27999-201ENSMUST00000183539 193 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm27905-201ENSMUST00000184005 207 ntBASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.62□□□□□ -1.99
Ccdc28bQ8CEG5 Gm44476-201ENSMUST00000196225 91 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms