Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm23588-201ENSMUST00000157659 99 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm22098-201ENSMUST00000157930 85 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm22727-201ENSMUST00000158090 116 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm22076-201ENSMUST00000158601 84 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm22891-201ENSMUST00000158641 164 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm23190-201ENSMUST00000180307 64 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm28648-201ENSMUST00000190092 343 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm44041-201ENSMUST00000203678 396 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc60Q8C4J0 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm26384-201ENSMUST00000102183 110 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm15846-201ENSMUST00000116022 320 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm14049-201ENSMUST00000121009 636 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm23212-201ENSMUST00000122718 60 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm22597-201ENSMUST00000157602 80 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Mir496b-201ENSMUST00000184935 113 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm43582-201ENSMUST00000196149 343 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm43556-201ENSMUST00000196186 681 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm44324-201ENSMUST00000198517 135 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm22974-201ENSMUST00000083301 103 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Gm23741-201ENSMUST00000097237 171 ntBASIC2.49□□□□□ -2.01
Ccdc60Q8C4J0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm12370-201ENSMUST00000117809 604 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm15844-201ENSMUST00000118016 576 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm23704-201ENSMUST00000158844 340 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm22290-201ENSMUST00000177655 107 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm22583-201ENSMUST00000178031 107 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Mir6997-201ENSMUST00000184313 71 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm37550-201ENSMUST00000193230 463 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm18341-201ENSMUST00000197538 622 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm43901-201ENSMUST00000203247 453 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm3442-201ENSMUST00000216808 710 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm24948-201ENSMUST00000082866 207 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm23096-201ENSMUST00000083447 107 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.48□□□□□ -2.01
Ccdc60Q8C4J0 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm22496-201ENSMUST00000104493 88 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm14887-201ENSMUST00000119522 663 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm11785-201ENSMUST00000120165 601 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm22452-201ENSMUST00000122804 104 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm22666-201ENSMUST00000158717 164 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm25175-201ENSMUST00000178712 79 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm11395-201ENSMUST00000181011 499 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm22229-201ENSMUST00000082987 108 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Mir208a-201ENSMUST00000083498 83 ntBASIC2.47□□□□□ -2.01
Ccdc60Q8C4J0 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm9225-201ENSMUST00000121921 836 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm24784-201ENSMUST00000157640 62 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm5224-201ENSMUST00000183060 350 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm28299-201ENSMUST00000189908 339 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc60Q8C4J0 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Gm24126-201ENSMUST00000104111 106 ntBASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Gm24280-201ENSMUST00000104237 134 ntBASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Gm12191-201ENSMUST00000118307 348 ntBASIC2.45□□□□□ -2.02
Ccdc60Q8C4J0 Gm9703-201ENSMUST00000119573 343 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms