Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm31230-201ENSMUST00000199725 785 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm45226-201ENSMUST00000206602 288 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Ccdc40Q8BI79 Gm26377-201ENSMUST00000102184 108 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm14558-201ENSMUST00000117458 381 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm4732-201ENSMUST00000118778 473 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm23860-201ENSMUST00000179446 132 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Mir6376-201ENSMUST00000185149 131 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm29848-201ENSMUST00000203107 295 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm44825-201ENSMUST00000207557 150 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm44598-201ENSMUST00000207566 150 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.4□□□□□ -2.03
Ccdc40Q8BI79 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm22752-201ENSMUST00000102083 109 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm25407-201ENSMUST00000104102 134 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm22494-201ENSMUST00000104495 128 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm15896-201ENSMUST00000118045 440 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm24517-201ENSMUST00000122560 107 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm16561-201ENSMUST00000163001 192 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm23619-201ENSMUST00000178411 94 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm23145-201ENSMUST00000178912 79 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm25474-201ENSMUST00000179052 94 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm22047-201ENSMUST00000179176 94 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm44449-201ENSMUST00000203610 153 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Mir30d-201ENSMUST00000083503 82 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.39□□□□□ -2.03
Ccdc40Q8BI79 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm24122-201ENSMUST00000104107 132 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm14007-201ENSMUST00000118288 210 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm15211-201ENSMUST00000118932 528 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm22718-201ENSMUST00000122701 315 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm24439-201ENSMUST00000157894 117 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm22517-201ENSMUST00000158265 136 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm23005-201ENSMUST00000158950 136 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Mir3076-201ENSMUST00000175415 60 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm18964-201ENSMUST00000193013 563 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm44182-201ENSMUST00000204052 115 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm44212-201ENSMUST00000205016 897 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm24313-201ENSMUST00000082561 133 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm22508-201ENSMUST00000082772 110 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm24490-201ENSMUST00000083803 98 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.38□□□□□ -2.03
Ccdc40Q8BI79 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm15175-201ENSMUST00000117629 132 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm14652-201ENSMUST00000118479 235 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm23206-201ENSMUST00000122720 184 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm25368-201ENSMUST00000158847 131 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm28900-201ENSMUST00000185232 156 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm42475-201ENSMUST00000201212 295 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ccdc40Q8BI79 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm12872-201ENSMUST00000121835 320 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm23469-201ENSMUST00000157131 104 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm23713-201ENSMUST00000157353 70 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm23752-201ENSMUST00000157584 115 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm22615-201ENSMUST00000158102 70 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm23777-201ENSMUST00000158994 259 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm24816-201ENSMUST00000175311 151 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm42578-201ENSMUST00000199960 194 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms