Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm3724-201ENSMUST00000197957 349 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Mir497-201ENSMUST00000200557 84 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Gm44794-201ENSMUST00000206550 411 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Gm5670-201ENSMUST00000093546 372 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Gm23516-201ENSMUST00000093728 107 ntBASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Clrn3Q8BHH8 Gm22936-201ENSMUST00000103955 126 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm14359-201ENSMUST00000118883 424 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm14428-201ENSMUST00000120408 822 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm14360-201ENSMUST00000120670 393 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm15167-201ENSMUST00000121997 187 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm14770-201ENSMUST00000122197 312 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm9498-201ENSMUST00000140849 291 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm24601-201ENSMUST00000157970 143 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm25557-201ENSMUST00000158084 315 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm25488-201ENSMUST00000158728 118 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm25368-201ENSMUST00000158847 131 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm4468-201ENSMUST00000170206 294 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm24713-201ENSMUST00000178850 107 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm24137-201ENSMUST00000180055 79 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm25448-201ENSMUST00000180065 107 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm22391-201ENSMUST00000180356 79 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm19891-201ENSMUST00000189771 303 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm23370-202ENSMUST00000197008 129 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm44609-201ENSMUST00000207157 460 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm9318-201ENSMUST00000222444 438 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Gm25124-201ENSMUST00000083345 164 ntBASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Clrn3Q8BHH8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm26002-201ENSMUST00000101915 107 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm23744-201ENSMUST00000104231 149 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm23551-201ENSMUST00000116852 121 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm16218-201ENSMUST00000155424 388 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm25961-201ENSMUST00000157174 135 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm24846-201ENSMUST00000158033 108 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm23963-201ENSMUST00000179603 77 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm28745-201ENSMUST00000190069 305 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Trbv7-201ENSMUST00000193339 402 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm42739-201ENSMUST00000200687 226 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm43232-201ENSMUST00000201346 364 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm10298-201ENSMUST00000074801 265 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.87□□□□□ -2.11
Clrn3Q8BHH8 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm12550-201ENSMUST00000118478 329 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm11352-201ENSMUST00000119264 517 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm26345-201ENSMUST00000157534 120 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Mir6370-201ENSMUST00000183510 120 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Mir6917-201ENSMUST00000184111 61 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Mir6376-201ENSMUST00000185149 131 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm28283-201ENSMUST00000185509 178 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm43582-201ENSMUST00000196149 343 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm42805-201ENSMUST00000196158 276 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm44024-201ENSMUST00000203008 476 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm44533-201ENSMUST00000207782 268 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm9973-202ENSMUST00000220926 166 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Mir222-201ENSMUST00000083537 79 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Snord7-201ENSMUST00000083781 97 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm26166-201ENSMUST00000083788 107 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Clrn3Q8BHH8 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Gm25563-201ENSMUST00000104603 74 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Gm14932-201ENSMUST00000117112 453 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Gm23118-201ENSMUST00000122657 187 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Mir6335-201ENSMUST00000184081 98 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.85□□□□□ -2.11
Clrn3Q8BHH8 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms