Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC163295.1-201ENSMUST00000227840 314 ntBASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Mir137-201ENSMUST00000083635 73 ntBASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ubfd1Q78JW9 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm11859-201ENSMUST00000118099 455 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm14551-201ENSMUST00000120802 256 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm24885-201ENSMUST00000158783 270 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm23196-201ENSMUST00000158806 107 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm8580-201ENSMUST00000160295 464 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm24819-201ENSMUST00000175094 166 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Mir7578-201ENSMUST00000183455 82 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm37085-201ENSMUST00000193780 196 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm43669-201ENSMUST00000198229 436 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm6615-201ENSMUST00000199426 631 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm43932-201ENSMUST00000204499 52 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm44519-201ENSMUST00000206486 122 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm33654-201ENSMUST00000221704 215 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm21937-201ENSMUST00000222825 218 ntBASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ubfd1Q78JW9 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm14973-201ENSMUST00000117248 255 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm15029-201ENSMUST00000119742 199 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm22435-201ENSMUST00000158552 128 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm26585-201ENSMUST00000180890 630 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm28000-201ENSMUST00000184380 85 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm43393-201ENSMUST00000200147 194 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm25203-202ENSMUST00000200458 216 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm7948-201ENSMUST00000212607 844 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm25203-201ENSMUST00000082842 215 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm23297-201ENSMUST00000083184 127 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm26166-201ENSMUST00000083788 107 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gm26164-201ENSMUST00000083793 104 ntBASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ubfd1Q78JW9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm14020-201ENSMUST00000118165 662 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm9059-201ENSMUST00000118319 183 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm12837-201ENSMUST00000120131 373 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm24504-201ENSMUST00000157679 100 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm20542-201ENSMUST00000174582 372 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm26866-201ENSMUST00000180414 802 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Mir7062-201ENSMUST00000185038 66 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm38238-201ENSMUST00000194334 346 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm43899-201ENSMUST00000203675 246 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ubfd1Q78JW9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm22779-201ENSMUST00000104085 107 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm25168-201ENSMUST00000104189 132 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm11798-201ENSMUST00000119150 421 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm15379-201ENSMUST00000121224 648 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm22073-201ENSMUST00000122668 189 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm37417-201ENSMUST00000195257 454 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms