Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm22136-201ENSMUST00000158751 268 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm36953-201ENSMUST00000195295 268 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm44336-201ENSMUST00000203696 468 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Snora23-201ENSMUST00000082517 184 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm23727-201ENSMUST00000083352 164 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Mir10a-201ENSMUST00000083585 110 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.23□□□□□ -1.89
Smarca1Q6PGB8 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm25509-201ENSMUST00000116985 106 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm14940-201ENSMUST00000119309 495 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm23000-201ENSMUST00000157083 139 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm26277-201ENSMUST00000157097 152 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm26278-201ENSMUST00000157098 132 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm9892-201ENSMUST00000182415 992 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm27700-201ENSMUST00000185003 81 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm5034-201ENSMUST00000199115 634 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm43083-201ENSMUST00000199594 476 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm32222-201ENSMUST00000203296 298 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm7495-201ENSMUST00000215099 426 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm23454-201ENSMUST00000083332 133 ntBASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Smarca1Q6PGB8 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm13355-201ENSMUST00000117996 317 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm23325-201ENSMUST00000157422 129 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm23016-201ENSMUST00000158431 62 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm7582-201ENSMUST00000160831 603 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm29231-201ENSMUST00000179850 319 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Mir7050-201ENSMUST00000184636 60 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm27588-201ENSMUST00000185096 263 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm33354-201ENSMUST00000195448 906 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Gm3867-201ENSMUST00000086108 279 ntBASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Smarca1Q6PGB8 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm22656-201ENSMUST00000104199 171 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm23911-201ENSMUST00000104596 134 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm12872-201ENSMUST00000121835 320 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm24691-201ENSMUST00000157762 140 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm6660-201ENSMUST00000179149 468 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm27532-201ENSMUST00000183726 113 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm44966-201ENSMUST00000208096 157 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.2□□□□□ -1.9
Smarca1Q6PGB8 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm12155-201ENSMUST00000121267 160 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm11819-201ENSMUST00000122192 372 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm23716-201ENSMUST00000157348 144 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm24419-201ENSMUST00000157875 332 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm25470-201ENSMUST00000175576 111 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm7837-201ENSMUST00000190873 412 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm37616-201ENSMUST00000193974 322 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms