Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm14073-201ENSMUST00000117344 381 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm14558-201ENSMUST00000117458 381 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm15029-201ENSMUST00000119742 199 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm5287-201ENSMUST00000120666 598 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm11834-201ENSMUST00000122257 585 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm24358-201ENSMUST00000158424 288 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm6788-201ENSMUST00000166459 270 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm17062-201ENSMUST00000166987 461 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm20543-201ENSMUST00000174200 726 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm24816-201ENSMUST00000175311 151 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Mir3076-201ENSMUST00000175415 60 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm8532-201ENSMUST00000179174 461 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm27648-201ENSMUST00000184315 107 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm8747-201ENSMUST00000195392 751 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm7495-201ENSMUST00000215099 426 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 LOC667541-201ENSMUST00000223408 278 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm26228-201ENSMUST00000082512 107 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm25080-201ENSMUST00000082526 107 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm25199-201ENSMUST00000083095 104 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Mir184-201ENSMUST00000083662 69 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Gm25518-201ENSMUST00000083864 107 ntBASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Snrnp40Q6PE01 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Mir687-201ENSMUST00000102166 89 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm22270-201ENSMUST00000104034 132 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm26247-201ENSMUST00000116702 91 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm12954-201ENSMUST00000118610 611 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm23956-201ENSMUST00000157211 119 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm3104-201ENSMUST00000171004 473 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm25476-201ENSMUST00000175125 185 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm23190-201ENSMUST00000180307 64 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm9892-201ENSMUST00000182415 992 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm37353-201ENSMUST00000194497 313 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Gm25853-201ENSMUST00000082793 132 ntBASIC2.59□□□□□ -1.99
Snrnp40Q6PE01 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Snrnp40Q6PE01 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Snrnp40Q6PE01 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.59□□□□□ -2
Snrnp40Q6PE01 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Snrnp40Q6PE01 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Snrnp40Q6PE01 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm23128-201ENSMUST00000104257 132 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm24889-201ENSMUST00000104388 132 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm11386-201ENSMUST00000117761 347 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm24914-201ENSMUST00000157285 313 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm25392-201ENSMUST00000157335 297 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm24213-201ENSMUST00000158255 258 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm22664-201ENSMUST00000158719 105 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm26335-201ENSMUST00000178449 107 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Mir7093-201ENSMUST00000184195 101 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm38238-201ENSMUST00000194334 346 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm23128-202ENSMUST00000196578 133 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm44465-201ENSMUST00000199536 114 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm43367-201ENSMUST00000199986 625 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm44519-201ENSMUST00000206486 122 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm24045-201ENSMUST00000083113 98 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm23247-201ENSMUST00000083373 107 ntBASIC2.58□□□□□ -2
Snrnp40Q6PE01 Gm25526-201ENSMUST00000104332 132 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm23987-201ENSMUST00000117039 129 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm15733-201ENSMUST00000132957 242 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm22080-201ENSMUST00000157591 106 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm24879-201ENSMUST00000158386 143 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm23862-201ENSMUST00000180342 94 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.57□□□□□ -2
Snrnp40Q6PE01 Gm37455-201ENSMUST00000191993 529 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.57□□□□□ -2
Snrnp40Q6PE01 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.57□□□□□ -2
Snrnp40Q6PE01 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
Snrnp40Q6PE01 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms