Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim27Q62158 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.01□□□□□ -1.93
Trim27Q62158 Gm19441-201ENSMUST00000221545 330 ntBASIC3.01□□□□□ -1.93
Trim27Q62158 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim27Q62158 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim27Q62158 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.01□□□□□ -1.93
Trim27Q62158 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim27Q62158 n-R5s207-201ENSMUST00000122497 118 ntBASIC3□□□□□ -1.93
Trim27Q62158 Gm23956-201ENSMUST00000157211 119 ntBASIC3□□□□□ -1.93
Trim27Q62158 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3□□□□□ -1.93
Trim27Q62158 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3□□□□□ -1.93
Trim27Q62158 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3□□□□□ -1.93
Trim27Q62158 Gm37658-201ENSMUST00000192672 315 ntBASIC3□□□□□ -1.93
Trim27Q62158 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3□□□□□ -1.93
Trim27Q62158 Gm45240-201ENSMUST00000211437 674 ntBASIC3□□□□□ -1.93
Trim27Q62158 AC160031.2-201ENSMUST00000218242 274 ntBASIC3□□□□□ -1.93
Trim27Q62158 Gm18774-201ENSMUST00000218269 601 ntBASIC3□□□□□ -1.93
Trim27Q62158 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim27Q62158 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim27Q62158 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim27Q62158 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim27Q62158 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Trim27Q62158 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim27Q62158 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim27Q62158 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim27Q62158 Gm15029-201ENSMUST00000119742 199 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm14852-201ENSMUST00000120065 647 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.99□□□□□ -1.93
Trim27Q62158 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trim27Q62158 Gm25243-201ENSMUST00000174912 207 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm18775-201ENSMUST00000190763 586 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm7692-201ENSMUST00000213534 409 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim27Q62158 Gm22622-201ENSMUST00000082870 129 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm23097-201ENSMUST00000083448 105 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Trim27Q62158 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim27Q62158 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.99□□□□□ -1.93
Trim27Q62158 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trim27Q62158 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim27Q62158 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim27Q62158 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm23803-201ENSMUST00000104610 132 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm7916-201ENSMUST00000120325 456 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm12443-201ENSMUST00000122308 323 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm26256-201ENSMUST00000122499 186 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm25808-201ENSMUST00000122784 284 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim27Q62158 Gm22793-201ENSMUST00000157227 330 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm22668-201ENSMUST00000158716 260 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm15914-201ENSMUST00000161922 309 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm24168-201ENSMUST00000178825 107 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm23190-201ENSMUST00000180307 64 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm5224-201ENSMUST00000183060 350 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm38238-201ENSMUST00000194334 346 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm37037-201ENSMUST00000194475 424 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm8747-201ENSMUST00000195392 751 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim27Q62158 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm26166-201ENSMUST00000083788 107 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Gm25628-201ENSMUST00000084002 105 ntBASIC2.98□□□□□ -1.93
Trim27Q62158 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Trim27Q62158 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim27Q62158 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim27Q62158 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trim27Q62158 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.97□□□□□ -1.93
Trim27Q62158 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.97□□□□□ -1.93
Trim27Q62158 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim27Q62158 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim27Q62158 Gm23422-201ENSMUST00000102000 107 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm9009-201ENSMUST00000117321 326 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm13756-201ENSMUST00000117618 222 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm23429-201ENSMUST00000122486 149 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim27Q62158 Gm6788-201ENSMUST00000166459 270 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm26652-202ENSMUST00000181672 475 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Mir7050-201ENSMUST00000184636 60 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm20058-201ENSMUST00000186939 284 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm6801-201ENSMUST00000190697 339 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm37455-201ENSMUST00000191993 529 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.97□□□□□ -1.93
Trim27Q62158 Gm42578-201ENSMUST00000199960 194 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm9762-201ENSMUST00000036976 444 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm25199-201ENSMUST00000083095 104 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm26494-201ENSMUST00000083154 143 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 Gm24493-201ENSMUST00000083805 143 ntBASIC2.97□□□□□ -1.93
Trim27Q62158 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
Trim27Q62158 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.96□□□□□ -1.94
Trim27Q62158 Gm9225-201ENSMUST00000121921 836 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms