Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Ift88Q61371 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ift88Q61371 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ift88Q61371 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm15844-201ENSMUST00000118016 576 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm13076-201ENSMUST00000118041 204 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm14837-201ENSMUST00000119688 206 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm16362-201ENSMUST00000135189 214 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.4□□□□□ -1.87
Ift88Q61371 Gm25817-201ENSMUST00000177758 121 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Spin2g-201ENSMUST00000178425 687 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm24766-201ENSMUST00000179182 121 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm27893-201ENSMUST00000184408 194 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Mir195b-201ENSMUST00000184814 97 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm28717-201ENSMUST00000189950 315 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm7837-201ENSMUST00000190873 412 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.4□□□□□ -1.87
Ift88Q61371 Gm44373-201ENSMUST00000196112 169 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm18453-201ENSMUST00000208000 626 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ift88Q61371 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Ift88Q61371 Gm33654-201ENSMUST00000221704 215 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm21937-201ENSMUST00000222825 218 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ift88Q61371 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ift88Q61371 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ift88Q61371 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ift88Q61371 Gm25698-201ENSMUST00000082897 107 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm22970-201ENSMUST00000083304 186 ntBASIC3.4□□□□□ -1.87
Ift88Q61371 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ift88Q61371 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Ift88Q61371 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ift88Q61371 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ift88Q61371 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ift88Q61371 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ift88Q61371 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ift88Q61371 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm23867-201ENSMUST00000122649 274 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.39□□□□□ -1.87
Ift88Q61371 Gm22435-201ENSMUST00000158552 128 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ift88Q61371 Gm17062-201ENSMUST00000166987 461 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Mir5710-201ENSMUST00000176884 69 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm25284-201ENSMUST00000180345 141 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC3.39□□□□□ -1.87
Ift88Q61371 Gm37290-201ENSMUST00000195775 339 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm9402-201ENSMUST00000196849 388 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm43393-201ENSMUST00000200147 194 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm44266-201ENSMUST00000205235 500 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Gm22979-201ENSMUST00000082609 159 ntBASIC3.39□□□□□ -1.87
Ift88Q61371 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ift88Q61371 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ift88Q61371 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ift88Q61371 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ift88Q61371 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ift88Q61371 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ift88Q61371 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm22488-201ENSMUST00000116811 127 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm11798-201ENSMUST00000119150 421 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm14593-201ENSMUST00000119948 294 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm14629-201ENSMUST00000122428 144 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.38□□□□□ -1.87
Ift88Q61371 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.38□□□□□ -1.87
Ift88Q61371 Gm22789-201ENSMUST00000157884 130 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm22328-201ENSMUST00000158074 112 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm27510-201ENSMUST00000158214 64 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm25835-201ENSMUST00000158917 144 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm8580-201ENSMUST00000160295 464 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ift88Q61371 Gm26928-201ENSMUST00000182674 572 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm27773-201ENSMUST00000184087 78 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm28629-201ENSMUST00000187309 263 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm28155-201ENSMUST00000191066 151 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm6842-201ENSMUST00000211361 390 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.38□□□□□ -1.87
Ift88Q61371 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm22806-201ENSMUST00000082738 136 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm22353-201ENSMUST00000083918 136 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.38□□□□□ -1.87
Ift88Q61371 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ift88Q61371 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ift88Q61371 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ift88Q61371 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ift88Q61371 Gm22073-201ENSMUST00000122668 189 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ift88Q61371 Gm24008-201ENSMUST00000157733 138 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 Gm23557-201ENSMUST00000157820 138 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 Gm24998-201ENSMUST00000157908 89 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 Mir5136-201ENSMUST00000175573 76 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 Gm26866-201ENSMUST00000180414 802 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Ift88Q61371 Gm7871-201ENSMUST00000195346 618 ntBASIC3.37□□□□□ -1.87
Ift88Q61371 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms