Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CtcfQ61164 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
CtcfQ61164 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm24118-201ENSMUST00000103972 126 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm12954-201ENSMUST00000118610 611 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm15760-201ENSMUST00000119553 283 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm14761-201ENSMUST00000121363 262 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm12872-201ENSMUST00000121835 320 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CtcfQ61164 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm23542-201ENSMUST00000158208 96 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm22085-201ENSMUST00000158344 110 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm23579-201ENSMUST00000158528 103 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21842-201ENSMUST00000177552 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21626-201ENSMUST00000177791 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21562-201ENSMUST00000177888 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21539-201ENSMUST00000177925 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm17522-201ENSMUST00000178144 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21599-201ENSMUST00000178249 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21914-201ENSMUST00000178452 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21723-201ENSMUST00000178692 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21916-201ENSMUST00000178771 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21801-201ENSMUST00000178865 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21633-201ENSMUST00000178941 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CtcfQ61164 Gm23191-201ENSMUST00000179147 107 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm23793-201ENSMUST00000179396 117 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21821-201ENSMUST00000179646 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm26180-201ENSMUST00000179942 107 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21588-201ENSMUST00000180074 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21780-201ENSMUST00000180128 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21572-201ENSMUST00000180134 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm21529-201ENSMUST00000180175 498 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm23523-201ENSMUST00000180190 107 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm24518-201ENSMUST00000180275 94 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm28755-201ENSMUST00000185773 199 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm28629-201ENSMUST00000187309 263 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm29370-202ENSMUST00000187476 499 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm28408-201ENSMUST00000191557 463 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.3□□□□□ -1.88
CtcfQ61164 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CtcfQ61164 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm26263-201ENSMUST00000083281 164 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Gm25411-201ENSMUST00000083760 151 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Olfr895-201ENSMUST00000093864 951 ntBASIC3.3□□□□□ -1.88
CtcfQ61164 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CtcfQ61164 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CtcfQ61164 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CtcfQ61164 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CtcfQ61164 Gm22023-201ENSMUST00000104354 130 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm11862-201ENSMUST00000119678 659 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm13210-201ENSMUST00000121483 273 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm15065-201ENSMUST00000121699 273 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.29□□□□□ -1.88
CtcfQ61164 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.29□□□□□ -1.88
CtcfQ61164 Gm22380-201ENSMUST00000157479 95 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm24499-201ENSMUST00000158446 104 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm27796-201ENSMUST00000183863 261 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm28534-201ENSMUST00000187744 676 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm43393-201ENSMUST00000200147 194 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm44041-201ENSMUST00000203678 396 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm18854-201ENSMUST00000211196 329 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm45860-201ENSMUST00000212700 334 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Snord42a-201ENSMUST00000082606 65 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.29□□□□□ -1.88
CtcfQ61164 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CtcfQ61164 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CtcfQ61164 Gm24890-201ENSMUST00000104389 102 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CtcfQ61164 Gm12255-201ENSMUST00000117184 284 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm14973-201ENSMUST00000117248 255 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm14355-201ENSMUST00000117352 264 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm14971-201ENSMUST00000117980 663 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm11556-201ENSMUST00000120751 288 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm11229-201ENSMUST00000121993 437 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm14333-201ENSMUST00000130484 264 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm14389-201ENSMUST00000140453 241 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.28□□□□□ -1.88
CtcfQ61164 Gm8207-201ENSMUST00000171204 502 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm26430-201ENSMUST00000178054 107 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm27698-201ENSMUST00000184060 249 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.28□□□□□ -1.88
CtcfQ61164 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.28□□□□□ -1.88
CtcfQ61164 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.28□□□□□ -1.88
CtcfQ61164 Gm25203-202ENSMUST00000200458 216 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms