Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm37037-201ENSMUST00000194475 424 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm43193-201ENSMUST00000197732 441 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm42475-201ENSMUST00000201212 295 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm29848-201ENSMUST00000203107 295 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm45150-201ENSMUST00000206051 467 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm44903-201ENSMUST00000206840 130 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm45522-201ENSMUST00000210784 166 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.16□□□□□ -2.06
Usf1Q61069 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Usf1Q61069 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm6030-201ENSMUST00000078768 402 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Usf1Q61069 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Usf1Q61069 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Usf1Q61069 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm24280-201ENSMUST00000104237 134 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Usf1Q61069 Gm11849-201ENSMUST00000121293 261 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm6568-201ENSMUST00000122274 697 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm25624-201ENSMUST00000157222 275 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm26414-201ENSMUST00000157674 269 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm26186-201ENSMUST00000157689 125 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm24439-201ENSMUST00000157894 117 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm11395-201ENSMUST00000181011 499 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm3852-201ENSMUST00000182781 264 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm28399-201ENSMUST00000186221 318 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm28572-201ENSMUST00000187444 318 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm44555-201ENSMUST00000209008 148 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Gm3442-201ENSMUST00000216808 710 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Usf1Q61069 Gm17890-201ENSMUST00000221419 757 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.15□□□□□ -2.07
Usf1Q61069 Gm23448-201ENSMUST00000083151 104 ntBASIC2.15□□□□□ -2.07
Usf1Q61069 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Usf1Q61069 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Usf1Q61069 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Usf1Q61069 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usf1Q61069 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usf1Q61069 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usf1Q61069 Gm15846-201ENSMUST00000116022 320 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Gm15029-201ENSMUST00000119742 199 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.14□□□□□ -2.07
Usf1Q61069 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Mir6335-201ENSMUST00000184081 98 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Gm28000-201ENSMUST00000184380 85 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Gm25820-201ENSMUST00000198589 127 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Gm42164-201ENSMUST00000198881 379 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.14□□□□□ -2.07
Usf1Q61069 Gm2628-201ENSMUST00000218019 426 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.14□□□□□ -2.07
Usf1Q61069 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.14□□□□□ -2.07
Usf1Q61069 Gm25636-201ENSMUST00000082666 133 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Usf1Q61069 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.14□□□□□ -2.07
Usf1Q61069 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usf1Q61069 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Usf1Q61069 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usf1Q61069 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Usf1Q61069 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Usf1Q61069 Gm15175-201ENSMUST00000117629 132 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Gm13876-201ENSMUST00000118451 261 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.13□□□□□ -2.07
Usf1Q61069 Gm23352-201ENSMUST00000158428 64 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usf1Q61069 Gm17062-201ENSMUST00000166987 461 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Gm17064-201ENSMUST00000167690 452 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Mir5099-201ENSMUST00000175257 74 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Gm24813-201ENSMUST00000175310 84 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.13□□□□□ -2.07
Usf1Q61069 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Gm42857-201ENSMUST00000200823 339 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Usf1Q61069 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.13□□□□□ -2.07
Usf1Q61069 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usf1Q61069 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Usf1Q61069 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Usf1Q61069 Gm26384-201ENSMUST00000102183 110 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm11065-201ENSMUST00000111462 228 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm14579-201ENSMUST00000117068 283 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm6954-201ENSMUST00000117416 225 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm14793-201ENSMUST00000118739 311 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms