Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm28828-201ENSMUST00000186601 696 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Gm17829-201ENSMUST00000219782 344 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 AC155167.3-201ENSMUST00000226349 217 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Gm22245-201ENSMUST00000082479 103 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Mir132-201ENSMUST00000083603 66 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Gm22868-201ENSMUST00000083955 164 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm23841-201ENSMUST00000116951 114 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm22027-201ENSMUST00000122737 127 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm25999-201ENSMUST00000175398 133 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Mir1251-201ENSMUST00000175486 84 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm26200-201ENSMUST00000180273 79 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm28267-201ENSMUST00000191093 265 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm36964-201ENSMUST00000191876 198 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 CT954323.1-201ENSMUST00000222774 229 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Gm22169-201ENSMUST00000083229 107 ntBASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scaf1Q5U4C3 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm42486-201ENSMUST00000200369 3486 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm24792-201ENSMUST00000104286 128 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm12721-201ENSMUST00000120621 268 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm45539-201ENSMUST00000210313 428 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm22294-201ENSMUST00000083308 104 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Snord14d-201ENSMUST00000083424 86 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.47□□□□□ -1.53
Scaf1Q5U4C3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Scaf1Q5U4C3 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm24867-201ENSMUST00000104161 107 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm23705-201ENSMUST00000104370 130 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm15162-201ENSMUST00000119325 283 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm23540-201ENSMUST00000157543 164 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm22968-201ENSMUST00000157955 118 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm37791-201ENSMUST00000195081 286 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm43814-201ENSMUST00000197851 413 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Gm45006-201ENSMUST00000206078 690 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Mir137-201ENSMUST00000083635 73 ntBASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scaf1Q5U4C3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm24096-201ENSMUST00000103905 110 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm10552-201ENSMUST00000113396 372 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm14020-201ENSMUST00000118165 662 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm7618-201ENSMUST00000121643 171 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm22320-201ENSMUST00000157149 312 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm2862-201ENSMUST00000161524 328 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm24308-201ENSMUST00000177773 114 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Mir713-201ENSMUST00000178651 108 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 AC165106.2-201ENSMUST00000226749 97 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm24457-201ENSMUST00000083196 105 ntBASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scaf1Q5U4C3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Mir541-201ENSMUST00000102097 90 ntBASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm26148-201ENSMUST00000157430 68 ntBASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm25454-201ENSMUST00000157947 315 ntBASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm43680-201ENSMUST00000199466 340 ntBASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm22507-201ENSMUST00000082773 160 ntBASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm23731-201ENSMUST00000083749 107 ntBASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Scaf1Q5U4C3 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Scaf1Q5U4C3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms