Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Gm22251-201ENSMUST00000083216 107 ntBASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Tsr1Q5SWD9 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm10552-201ENSMUST00000113396 372 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm15670-201ENSMUST00000117740 447 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm15067-201ENSMUST00000119534 156 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm23534-201ENSMUST00000157539 97 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm23496-201ENSMUST00000157741 248 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm22968-201ENSMUST00000157955 118 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm24877-201ENSMUST00000158779 116 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Mir5103-201ENSMUST00000175111 79 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Mir7657-201ENSMUST00000196051 57 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm2522-201ENSMUST00000204280 322 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm39147-201ENSMUST00000211376 465 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 AC164086.1-201ENSMUST00000221038 289 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 AC122418.1-201ENSMUST00000225012 511 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm22421-201ENSMUST00000083058 107 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm23038-201ENSMUST00000083873 104 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC5.03□□□□□ -1.6
Tsr1Q5SWD9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm15714-201ENSMUST00000117168 250 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm12934-201ENSMUST00000119221 343 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm11790-201ENSMUST00000119569 455 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm13867-201ENSMUST00000120844 395 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm25447-201ENSMUST00000158997 128 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm27492-201ENSMUST00000185194 187 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm22683-201ENSMUST00000082854 137 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm24355-201ENSMUST00000082858 122 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm21033-201ENSMUST00000208590 2608 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.02□□□□□ -1.61
Tsr1Q5SWD9 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Mir294-201ENSMUST00000104710 84 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm22553-201ENSMUST00000157797 295 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm17161-201ENSMUST00000169187 524 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm29613-201ENSMUST00000185846 313 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm28976-201ENSMUST00000188070 144 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm29544-201ENSMUST00000188860 313 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm28808-201ENSMUST00000190978 313 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm19786-201ENSMUST00000222589 580 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 AC154262.1-201ENSMUST00000225976 286 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Mir30b-201ENSMUST00000083542 96 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm23796-201ENSMUST00000084011 160 ntBASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Tsr1Q5SWD9 Gm43404-201ENSMUST00000200424 2534 ntBASIC5□□□□□ -1.61
Tsr1Q5SWD9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Tsr1Q5SWD9 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Tsr1Q5SWD9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms