Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm23923-201ENSMUST00000104108 133 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm15714-201ENSMUST00000117168 250 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm14973-201ENSMUST00000117248 255 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm12878-201ENSMUST00000118744 332 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm13239-201ENSMUST00000119920 637 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm14238-201ENSMUST00000120227 323 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm11891-201ENSMUST00000121241 619 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm22789-201ENSMUST00000157884 130 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm25066-201ENSMUST00000158145 123 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm24264-201ENSMUST00000179835 94 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm44301-201ENSMUST00000200362 143 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm19457-201ENSMUST00000200995 448 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm46312-201ENSMUST00000220961 420 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm25130-201ENSMUST00000082650 156 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm25409-201ENSMUST00000083764 131 ntBASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm22544-201ENSMUST00000104349 127 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm22497-201ENSMUST00000104499 131 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm24592-201ENSMUST00000122505 106 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm25220-201ENSMUST00000157546 95 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm25888-201ENSMUST00000157778 302 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm22538-201ENSMUST00000158169 299 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm2966-201ENSMUST00000166052 481 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm27532-201ENSMUST00000183726 113 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Mir6380-201ENSMUST00000184334 81 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm18403-201ENSMUST00000192907 529 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm42454-201ENSMUST00000196805 1181 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm43723-201ENSMUST00000196886 189 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm23370-202ENSMUST00000197008 129 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm44665-201ENSMUST00000205381 251 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm22299-201ENSMUST00000082663 136 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Mir148b-201ENSMUST00000083626 97 ntBASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC0.71□□□□□ -2.3
Trav3-1Q5R1I8 Gm44708-201ENSMUST00000205580 2237 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 AC153881.3-201ENSMUST00000218494 1561 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm11784-201ENSMUST00000118568 474 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm11606-201ENSMUST00000120706 617 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm11430-201ENSMUST00000121317 217 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm22257-201ENSMUST00000158687 301 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm25069-201ENSMUST00000175238 86 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm18397-201ENSMUST00000176704 587 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Mir6408-201ENSMUST00000183643 91 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Mir6943-201ENSMUST00000185186 66 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm37377-201ENSMUST00000191733 304 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm18433-201ENSMUST00000192747 197 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm18546-201ENSMUST00000197245 676 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 AC166830.1-201ENSMUST00000224201 533 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 AC129017.1-201ENSMUST00000228363 270 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm25592-201ENSMUST00000082635 131 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Gm22740-201ENSMUST00000083439 109 ntBASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trav3-1Q5R1I8 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm22689-201ENSMUST00000102452 110 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Mir344e-201ENSMUST00000104677 66 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm24855-201ENSMUST00000104848 97 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm24274-201ENSMUST00000116787 124 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm12417-201ENSMUST00000119153 403 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm13903-201ENSMUST00000120945 193 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm14845-201ENSMUST00000121259 306 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm27588-201ENSMUST00000185096 263 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Gm43955-201ENSMUST00000204332 142 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Snord14a-201ENSMUST00000082807 87 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Mir429-201ENSMUST00000083493 83 ntBASIC0.69□□□□□ -2.3
Trav3-1Q5R1I8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms