Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mir6411-201ENSMUST00000183556 108 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm27248-201ENSMUST00000184004 166 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm19891-201ENSMUST00000189771 303 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm10298-201ENSMUST00000074801 265 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm24622-201ENSMUST00000082619 162 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm25755-201ENSMUST00000083396 107 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm12393-201ENSMUST00000117084 848 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14674-201ENSMUST00000117816 342 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14774-201ENSMUST00000117857 536 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm11784-201ENSMUST00000118568 474 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14913-201ENSMUST00000120011 1093 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14360-201ENSMUST00000120670 393 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm25392-201ENSMUST00000157335 297 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm24394-201ENSMUST00000158141 123 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm24174-201ENSMUST00000158933 111 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm28000-201ENSMUST00000184380 85 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm37771-201ENSMUST00000193121 265 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm37579-201ENSMUST00000194291 142 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm44384-201ENSMUST00000200208 114 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Gm26126-201ENSMUST00000083188 164 ntBASIC1.34□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm12814-201ENSMUST00000117091 846 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm13432-201ENSMUST00000118861 241 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm15183-201ENSMUST00000118933 348 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm15115-201ENSMUST00000121145 264 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23718-201ENSMUST00000157350 307 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm24601-201ENSMUST00000157970 143 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm24846-201ENSMUST00000158033 108 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm24177-201ENSMUST00000158927 131 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Mir7026-201ENSMUST00000184384 67 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm37568-201ENSMUST00000191755 364 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm18433-201ENSMUST00000192747 197 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm44324-201ENSMUST00000198517 135 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22265-201ENSMUST00000082947 116 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Mir148b-201ENSMUST00000083626 97 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Gm26327-201ENSMUST00000093724 111 ntBASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav5d-4Q5R1F6 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm13355-201ENSMUST00000117996 317 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm12656-201ENSMUST00000118149 577 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22611-201ENSMUST00000158288 150 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Snord11-201ENSMUST00000158468 84 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm27861-201ENSMUST00000183920 214 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm18667-201ENSMUST00000186523 484 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm33866-201ENSMUST00000196911 289 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22061-201ENSMUST00000082557 107 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav5d-4Q5R1F6 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm15526-201ENSMUST00000112504 204 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm13194-201ENSMUST00000142299 311 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm21744-201ENSMUST00000178403 662 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm21171-201ENSMUST00000180048 673 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Mir6370-201ENSMUST00000183510 120 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29413-201ENSMUST00000186019 880 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm28700-201ENSMUST00000187614 579 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29639-201ENSMUST00000188375 580 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm28843-201ENSMUST00000189198 678 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29546-201ENSMUST00000191171 678 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm37684-201ENSMUST00000192779 355 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Mir7118-201ENSMUST00000197760 61 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm43578-201ENSMUST00000201250 459 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm45071-201ENSMUST00000205353 571 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm45365-201ENSMUST00000209489 256 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm25257-201ENSMUST00000083907 110 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms