Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm24281-201ENSMUST00000104234 136 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm22148-201ENSMUST00000104445 107 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Mir105-201ENSMUST00000104655 80 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm11432-201ENSMUST00000117334 231 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm2830-201ENSMUST00000140330 385 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm22476-201ENSMUST00000158902 100 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm24926-201ENSMUST00000178053 79 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm22632-201ENSMUST00000178266 79 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm29668-201ENSMUST00000187802 315 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm17966-201ENSMUST00000193453 594 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm43853-201ENSMUST00000197162 301 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 AC159252.1-201ENSMUST00000224450 553 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim41Q5NCC3 n-R5s205-201ENSMUST00000083149 125 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm25896-201ENSMUST00000083713 136 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Gm25651-201ENSMUST00000083782 119 ntBASIC7.4□□□□□ -1.22
Trim41Q5NCC3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.23
Trim41Q5NCC3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm38259-201ENSMUST00000194602 3534 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm15304-201ENSMUST00000122150 2640 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm23271-201ENSMUST00000104052 124 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm11971-201ENSMUST00000117715 288 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm12926-201ENSMUST00000121158 409 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm25805-201ENSMUST00000122788 108 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm42988-201ENSMUST00000198116 225 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm44182-201ENSMUST00000204052 115 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm43955-201ENSMUST00000204332 142 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm23042-201ENSMUST00000083866 101 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 AC152981.1-201ENSMUST00000218320 2480 ntBASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim41Q5NCC3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm13922-201ENSMUST00000119505 156 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm12086-201ENSMUST00000120863 228 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm25424-201ENSMUST00000157612 58 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm26088-201ENSMUST00000157896 131 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm26036-201ENSMUST00000158149 144 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm25069-201ENSMUST00000175238 86 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm28830-201ENSMUST00000188192 213 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm18956-201ENSMUST00000192857 480 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm29704-201ENSMUST00000196011 253 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm44308-201ENSMUST00000197080 99 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm26121-201ENSMUST00000083364 162 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC7.38□□□□□ -1.23
Trim41Q5NCC3 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm12571-201ENSMUST00000118132 243 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm14516-201ENSMUST00000120012 252 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Mir8106-201ENSMUST00000184520 139 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Trbv6-201ENSMUST00000193743 276 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm45245-201ENSMUST00000210082 376 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 AC132615.1-201ENSMUST00000213873 255 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm23847-201ENSMUST00000083829 110 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm28634-201ENSMUST00000191087 2613 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Gm7452-202ENSMUST00000202891 3039 ntBASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
Trim41Q5NCC3 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Gm9911-201ENSMUST00000211467 2802 ntBASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC7.36□□□□□ -1.23
Trim41Q5NCC3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Gm12793-201ENSMUST00000119268 292 ntBASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC7.36□□□□□ -1.23
Trim41Q5NCC3 AC160984.2-201ENSMUST00000224927 791 ntBASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim41Q5NCC3 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms