Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm8041-201ENSMUST00000199755 616 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm44472-201ENSMUST00000204922 943 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.26□□□□□ -2.05
Usp28Q5I043 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.26□□□□□ -2.05
Usp28Q5I043 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.26□□□□□ -2.05
Usp28Q5I043 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Usp28Q5I043 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Usp28Q5I043 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm22771-201ENSMUST00000104449 91 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm15223-201ENSMUST00000120989 826 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm14049-201ENSMUST00000121009 636 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm12096-201ENSMUST00000121149 829 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm11891-201ENSMUST00000121241 619 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm13368-201ENSMUST00000122443 430 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm26345-201ENSMUST00000157534 120 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm22611-201ENSMUST00000158288 150 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm23704-201ENSMUST00000158844 340 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm24086-201ENSMUST00000175171 98 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm23144-201ENSMUST00000180226 107 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm11395-201ENSMUST00000181011 499 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm10193-201ENSMUST00000188288 231 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm37029-201ENSMUST00000195773 239 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm44818-201ENSMUST00000206608 358 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.25□□□□□ -2.05
Usp28Q5I043 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp28Q5I043 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
Usp28Q5I043 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
Usp28Q5I043 Gm24948-201ENSMUST00000082866 207 ntBASIC2.25□□□□□ -2.05
Usp28Q5I043 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Usp28Q5I043 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usp28Q5I043 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Usp28Q5I043 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Usp28Q5I043 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm26147-201ENSMUST00000104479 114 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usp28Q5I043 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm13085-201ENSMUST00000118356 171 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm14602-201ENSMUST00000118625 340 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm11785-201ENSMUST00000120165 601 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm13602-201ENSMUST00000122405 493 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm25624-201ENSMUST00000157222 275 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm25488-201ENSMUST00000158728 118 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm27245-201ENSMUST00000184385 376 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm28627-201ENSMUST00000186141 453 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm21673-201ENSMUST00000186640 436 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm21135-201ENSMUST00000189023 436 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm44923-201ENSMUST00000206673 85 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm7692-201ENSMUST00000213534 409 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm25586-201ENSMUST00000082499 112 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.24□□□□□ -2.05
Usp28Q5I043 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Usp28Q5I043 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm12934-201ENSMUST00000119221 343 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm23124-201ENSMUST00000157650 107 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm17538-201ENSMUST00000168236 327 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Mir6402-201ENSMUST00000183406 80 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm28169-201ENSMUST00000190342 345 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm18775-201ENSMUST00000190763 586 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm18296-201ENSMUST00000192475 783 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm19202-201ENSMUST00000198096 808 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm43955-201ENSMUST00000204332 142 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm45366-201ENSMUST00000209828 384 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Usp28Q5I043 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm22978-201ENSMUST00000082607 160 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm22229-201ENSMUST00000082987 108 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm24268-201ENSMUST00000082990 110 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Mir208a-201ENSMUST00000083498 83 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm22353-201ENSMUST00000083918 136 ntBASIC2.23□□□□□ -2.05
Usp28Q5I043 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm26154-201ENSMUST00000102339 96 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Mir344e-201ENSMUST00000104677 66 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms