Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 Gm26207-201ENSMUST00000082909 104 ntBASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 Gm22425-201ENSMUST00000158532 138 ntBASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 Gm27028-201ENSMUST00000182303 399 ntBASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 Gm10925-201ENSMUST00000189941 678 ntBASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.03□□□□□ -2.24
Ccdc88bQ4QRL3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
Ccdc88bQ4QRL3 Gm24049-201ENSMUST00000102409 100 ntBASIC1.02□□□□□ -2.25
Ccdc88bQ4QRL3 Mir6896-201ENSMUST00000198033 73 ntBASIC1.02□□□□□ -2.25
Ccdc88bQ4QRL3 Gm24611-201ENSMUST00000083272 107 ntBASIC1.02□□□□□ -2.25
Ccdc88bQ4QRL3 Mir224-201ENSMUST00000083608 82 ntBASIC1.02□□□□□ -2.25
Ccdc88bQ4QRL3 Gm12872-201ENSMUST00000121835 320 ntBASIC1.01□□□□□ -2.25
Ccdc88bQ4QRL3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.01□□□□□ -2.25
Ccdc88bQ4QRL3 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.01□□□□□ -2.25
Ccdc88bQ4QRL3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Gm25107-201ENSMUST00000122472 129 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Gm29492-201ENSMUST00000187124 457 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 AC147101.2-201ENSMUST00000219756 184 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Gm11284-201ENSMUST00000121910 1887 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Gm17976-201ENSMUST00000184037 1909 ntBASIC1□□□□□ -2.25
Ccdc88bQ4QRL3 Gm12507-201ENSMUST00000119155 415 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm22663-201ENSMUST00000158721 102 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm17085-201ENSMUST00000165425 502 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm7897-201ENSMUST00000193981 554 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm45288-201ENSMUST00000210236 151 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm33654-201ENSMUST00000221704 215 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 n-R5s79-201ENSMUST00000083071 120 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm11693-201ENSMUST00000119625 565 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm14840-201ENSMUST00000122135 594 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm22561-201ENSMUST00000157331 84 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm44989-201ENSMUST00000204749 217 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 AC154271.1-201ENSMUST00000224780 383 ntBASIC0.99□□□□□ -2.25
Ccdc88bQ4QRL3 Gm22082-201ENSMUST00000157587 161 ntBASIC0.98□□□□□ -2.25
Ccdc88bQ4QRL3 Gm20118-201ENSMUST00000187207 162 ntBASIC0.98□□□□□ -2.25
Ccdc88bQ4QRL3 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.97□□□□□ -2.25
Ccdc88bQ4QRL3 Gm15126-201ENSMUST00000118631 833 ntBASIC0.97□□□□□ -2.25
Ccdc88bQ4QRL3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.97□□□□□ -2.25
Ccdc88bQ4QRL3 Mir6402-201ENSMUST00000183406 80 ntBASIC0.97□□□□□ -2.25
Ccdc88bQ4QRL3 Gm44384-201ENSMUST00000200208 114 ntBASIC0.97□□□□□ -2.25
Ccdc88bQ4QRL3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
Ccdc88bQ4QRL3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Ccdc88bQ4QRL3 Gm14008-201ENSMUST00000120483 274 ntBASIC0.96□□□□□ -2.26
Ccdc88bQ4QRL3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.96□□□□□ -2.26
Ccdc88bQ4QRL3 Gm8217-201ENSMUST00000119136 465 ntBASIC0.95□□□□□ -2.26
Ccdc88bQ4QRL3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.95□□□□□ -2.26
Ccdc88bQ4QRL3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.95□□□□□ -2.26
Ccdc88bQ4QRL3 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.95□□□□□ -2.26
Ccdc88bQ4QRL3 Gm11857-201ENSMUST00000119817 324 ntBASIC0.94□□□□□ -2.26
Ccdc88bQ4QRL3 Gm4916-201ENSMUST00000126139 642 ntBASIC0.94□□□□□ -2.26
Ccdc88bQ4QRL3 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Ccdc88bQ4QRL3 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC0.94□□□□□ -2.26
Ccdc88bQ4QRL3 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Ccdc88bQ4QRL3 Gm14674-201ENSMUST00000117816 342 ntBASIC0.93□□□□□ -2.26
Ccdc88bQ4QRL3 Gm5287-201ENSMUST00000120666 598 ntBASIC0.93□□□□□ -2.26
Ccdc88bQ4QRL3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.93□□□□□ -2.26
Ccdc88bQ4QRL3 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.93□□□□□ -2.26
Ccdc88bQ4QRL3 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Ccdc88bQ4QRL3 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.93□□□□□ -2.26
Ccdc88bQ4QRL3 Gm23749-201ENSMUST00000104223 131 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm23124-201ENSMUST00000157650 107 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm22483-201ENSMUST00000157986 274 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm24304-201ENSMUST00000177635 107 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm37219-201ENSMUST00000192036 926 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm18691-201ENSMUST00000203593 872 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm35736-201ENSMUST00000203681 313 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm12096-201ENSMUST00000121149 829 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm1989-201ENSMUST00000126244 636 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm45688-201ENSMUST00000210002 101 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm23455-201ENSMUST00000083331 100 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm26064-201ENSMUST00000083381 109 ntBASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
Ccdc88bQ4QRL3 Gm23907-201ENSMUST00000104595 189 ntBASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm37029-201ENSMUST00000195773 239 ntBASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm43199-201ENSMUST00000200019 307 ntBASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm45207-201ENSMUST00000207469 145 ntBASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Ccdc88bQ4QRL3 Gm23167-201ENSMUST00000157155 103 ntBASIC0.9□□□□□ -2.27
Ccdc88bQ4QRL3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms