Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm23422-201ENSMUST00000102000 107 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm14593-201ENSMUST00000119948 294 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm7071-201ENSMUST00000120458 462 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm12779-201ENSMUST00000121496 143 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm14530-201ENSMUST00000122391 333 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm2830-201ENSMUST00000140330 385 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm23600-201ENSMUST00000157260 71 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm23476-201ENSMUST00000158881 274 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm20718-201ENSMUST00000176058 259 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm26622-201ENSMUST00000180520 298 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Mir6408-201ENSMUST00000183643 91 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm28860-201ENSMUST00000188103 313 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm37455-201ENSMUST00000191993 529 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm45513-201ENSMUST00000210228 376 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Rny3-201ENSMUST00000083011 102 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trim40Q3UWA4 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.45□□□□□ -2.02
Trim40Q3UWA4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Mir673-201ENSMUST00000102361 91 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm11512-201ENSMUST00000119669 663 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm25270-201ENSMUST00000122606 138 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm23223-201ENSMUST00000158119 127 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm24314-201ENSMUST00000158274 123 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm22668-201ENSMUST00000158716 260 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm20689-201ENSMUST00000176033 279 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm19694-201ENSMUST00000192364 505 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm6615-201ENSMUST00000199426 631 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm44465-201ENSMUST00000199536 114 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm18854-201ENSMUST00000211196 329 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm29809-201ENSMUST00000218423 493 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Gm23042-201ENSMUST00000083866 101 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.44□□□□□ -2.02
Trim40Q3UWA4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm23911-201ENSMUST00000104596 134 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 DQ267100-201ENSMUST00000122600 72 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm24780-201ENSMUST00000157635 143 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm23033-201ENSMUST00000157996 134 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm17072-201ENSMUST00000166673 658 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm23725-201ENSMUST00000177876 107 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm23523-201ENSMUST00000180190 107 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir6926-201ENSMUST00000184562 68 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm28211-201ENSMUST00000190920 315 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm43626-201ENSMUST00000198575 162 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm43367-201ENSMUST00000199986 625 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm44726-201ENSMUST00000203427 217 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Gm22577-201ENSMUST00000083731 109 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Olfr575-201ENSMUST00000084812 957 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Olfr895-201ENSMUST00000093864 951 ntBASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trim40Q3UWA4 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm25308-201ENSMUST00000104171 158 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm13806-201ENSMUST00000117822 325 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm26186-201ENSMUST00000157689 125 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm23559-201ENSMUST00000157824 103 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms