Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm24661-201ENSMUST00000083205 104 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm23645-201ENSMUST00000083228 108 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm23744-201ENSMUST00000104231 149 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm14868-201ENSMUST00000117840 216 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm11556-201ENSMUST00000120751 288 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm22733-201ENSMUST00000158094 91 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm15900-201ENSMUST00000161584 342 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm23619-201ENSMUST00000178411 94 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm25474-201ENSMUST00000179052 94 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm22047-201ENSMUST00000179176 94 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm27817-201ENSMUST00000184302 233 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm19089-201ENSMUST00000197207 613 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm45590-201ENSMUST00000209715 262 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Gm25796-201ENSMUST00000082645 163 ntBASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26504-201ENSMUST00000102033 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm23109-201ENSMUST00000116867 126 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26280-201ENSMUST00000157096 101 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm24769-201ENSMUST00000158506 129 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm8292-201ENSMUST00000162574 396 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm16326-201ENSMUST00000162843 414 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26502-201ENSMUST00000177732 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm25350-201ENSMUST00000177849 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm23446-201ENSMUST00000177977 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26201-201ENSMUST00000178047 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm24711-201ENSMUST00000178062 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm24609-201ENSMUST00000178166 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm23265-201ENSMUST00000178321 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm22812-201ENSMUST00000178329 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26246-201ENSMUST00000178388 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm23933-201ENSMUST00000178405 79 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm25155-201ENSMUST00000178450 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm24760-201ENSMUST00000178530 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm22285-201ENSMUST00000178576 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm22417-201ENSMUST00000178656 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26270-201ENSMUST00000178690 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm23313-201ENSMUST00000178931 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm23089-201ENSMUST00000178947 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm24153-201ENSMUST00000179280 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm25597-201ENSMUST00000179388 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm25816-201ENSMUST00000179764 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26188-201ENSMUST00000179963 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm26433-201ENSMUST00000180227 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm22128-201ENSMUST00000180346 94 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm7871-201ENSMUST00000195346 618 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm44609-201ENSMUST00000207157 460 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm45791-201ENSMUST00000212908 352 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.22□□□□□ -2.05
Upf3aQ3ULJ3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
Upf3aQ3ULJ3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Upf3aQ3ULJ3 Gm12386-201ENSMUST00000117380 688 ntBASIC2.21□□□□□ -2.06
Upf3aQ3ULJ3 Gm5287-201ENSMUST00000120666 598 ntBASIC2.21□□□□□ -2.06
Upf3aQ3ULJ3 Gm25321-201ENSMUST00000122558 102 ntBASIC2.21□□□□□ -2.06
Upf3aQ3ULJ3 Gm22452-201ENSMUST00000122804 104 ntBASIC2.21□□□□□ -2.06
Upf3aQ3ULJ3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms