Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm26473-201ENSMUST00000116763 127 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm14558-201ENSMUST00000117458 381 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm13510-201ENSMUST00000118659 429 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm12806-201ENSMUST00000119384 268 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm6574-201ENSMUST00000120037 362 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm11522-201ENSMUST00000120533 176 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm14841-201ENSMUST00000121067 758 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 AA413626-201ENSMUST00000121125 494 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm16428-201ENSMUST00000121193 723 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm26194-201ENSMUST00000175036 71 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm27245-201ENSMUST00000184385 376 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm7858-201ENSMUST00000190177 622 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm9227-201ENSMUST00000194733 566 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Mir3069-201ENSMUST00000198802 65 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm44011-201ENSMUST00000203336 394 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm44142-201ENSMUST00000203358 311 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Snord38a-201ENSMUST00000083746 71 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm25411-201ENSMUST00000083760 151 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trafd1Q3UDK1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.4□□□□□ -2.02
Trafd1Q3UDK1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trafd1Q3UDK1 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.4□□□□□ -2.02
Trafd1Q3UDK1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.4□□□□□ -2.02
Trafd1Q3UDK1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm26342-201ENSMUST00000104557 129 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm14918-201ENSMUST00000118153 268 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm11359-201ENSMUST00000120039 567 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm24075-201ENSMUST00000158175 72 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm24358-201ENSMUST00000158424 288 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm24264-201ENSMUST00000179835 94 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Mir6341-201ENSMUST00000183490 121 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm8151-201ENSMUST00000184817 871 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm28399-201ENSMUST00000186221 318 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm28572-201ENSMUST00000187444 318 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm28650-201ENSMUST00000188413 411 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm18551-201ENSMUST00000195594 642 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm37029-201ENSMUST00000195773 239 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm42164-201ENSMUST00000198881 379 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm15235-201ENSMUST00000200572 194 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm45687-201ENSMUST00000209454 155 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm24948-201ENSMUST00000082866 207 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm26263-201ENSMUST00000083281 164 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trafd1Q3UDK1 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm22750-201ENSMUST00000102076 103 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm22658-201ENSMUST00000104196 155 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm24889-201ENSMUST00000104388 132 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm14652-201ENSMUST00000118479 235 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm22611-201ENSMUST00000158288 150 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm24771-201ENSMUST00000158508 137 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm22011-201ENSMUST00000158790 123 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm25642-201ENSMUST00000175137 66 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm27220-201ENSMUST00000183453 262 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm37658-201ENSMUST00000192672 315 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm8747-201ENSMUST00000195392 751 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm45240-201ENSMUST00000211437 674 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm9762-201ENSMUST00000036976 444 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Ear14-201ENSMUST00000049559 468 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm22622-201ENSMUST00000082870 129 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.39□□□□□ -2.03
Trafd1Q3UDK1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms