Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm12926-201ENSMUST00000121158 409 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm13602-201ENSMUST00000122405 493 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm8207-201ENSMUST00000171204 502 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm26177-201ENSMUST00000178683 107 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm27722-201ENSMUST00000183908 76 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Mir6376-201ENSMUST00000185149 131 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm37579-201ENSMUST00000194291 142 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm33354-201ENSMUST00000195448 906 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm43026-201ENSMUST00000202972 325 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Gm24948-201ENSMUST00000082866 207 ntBASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim43aQ3TL54 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm23010-201ENSMUST00000104151 126 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm13510-201ENSMUST00000118659 429 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm26256-201ENSMUST00000122499 186 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm24836-201ENSMUST00000122609 108 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm22452-201ENSMUST00000122804 104 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm23230-201ENSMUST00000157298 133 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm24572-201ENSMUST00000175505 88 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm24264-201ENSMUST00000179835 94 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm23648-201ENSMUST00000180301 107 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm9892-201ENSMUST00000182415 992 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm28412-201ENSMUST00000187243 177 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm38231-201ENSMUST00000192030 347 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm45654-201ENSMUST00000210980 123 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm46136-201ENSMUST00000214730 565 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm19326-201ENSMUST00000219818 326 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm7214-201ENSMUST00000222428 272 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm24165-201ENSMUST00000082718 128 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm23506-201ENSMUST00000083077 107 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm16261-201ENSMUST00000096813 205 ntBASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Trim43aQ3TL54 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm24601-201ENSMUST00000157970 143 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm24222-201ENSMUST00000158834 93 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm27991-201ENSMUST00000184804 137 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm32175-201ENSMUST00000193641 346 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm44408-201ENSMUST00000200205 66 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm43955-201ENSMUST00000204332 142 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm22265-201ENSMUST00000082947 116 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.88□□□□□ -2.11
Trim43aQ3TL54 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Mir873a-201ENSMUST00000104863 77 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm25836-201ENSMUST00000158918 123 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm3102-201ENSMUST00000164236 489 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Mir7678-201ENSMUST00000185076 71 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm37743-201ENSMUST00000194645 376 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm44125-201ENSMUST00000203068 448 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm44615-201ENSMUST00000206548 358 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm9068-201ENSMUST00000217393 455 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm7984-201ENSMUST00000060640 538 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trim43aQ3TL54 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.87□□□□□ -2.11
Trim43aQ3TL54 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trim43aQ3TL54 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trim43aQ3TL54 Gm12646-201ENSMUST00000119144 238 ntBASIC1.86□□□□□ -2.11
Trim43aQ3TL54 Gm15177-201ENSMUST00000120491 577 ntBASIC1.86□□□□□ -2.11
Trim43aQ3TL54 Gm2768-201ENSMUST00000121062 250 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 277.8 ms