Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm12982-201ENSMUST00000117408 190 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm15926-201ENSMUST00000120492 550 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm14810-201ENSMUST00000121628 486 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm14562-201ENSMUST00000129885 543 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col8a1Q00780 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm22314-201ENSMUST00000158007 281 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm25863-201ENSMUST00000158249 329 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm17100-201ENSMUST00000168963 272 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm18341-201ENSMUST00000197538 622 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm44092-201ENSMUST00000204470 258 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm19908-201ENSMUST00000204684 391 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.44□□□□□ -1.86
Col8a1Q00780 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm23677-201ENSMUST00000083156 104 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Mir34b-201ENSMUST00000083558 84 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col8a1Q00780 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col8a1Q00780 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col8a1Q00780 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col8a1Q00780 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm11673-201ENSMUST00000117846 331 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm14119-201ENSMUST00000119511 235 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm14586-201ENSMUST00000119571 408 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm11982-201ENSMUST00000121480 314 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm22321-201ENSMUST00000157152 104 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm23326-201ENSMUST00000157419 105 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm23752-201ENSMUST00000157584 115 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm23640-201ENSMUST00000157860 104 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm22315-201ENSMUST00000158010 143 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm20651-201ENSMUST00000177219 329 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm37617-201ENSMUST00000194309 159 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm43424-201ENSMUST00000200484 253 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col8a1Q00780 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm44824-201ENSMUST00000207021 229 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm30674-201ENSMUST00000214523 392 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col8a1Q00780 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Gm22062-201ENSMUST00000082563 107 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col8a1Q00780 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col8a1Q00780 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col8a1Q00780 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
Col8a1Q00780 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.43□□□□□ -1.86
Col8a1Q00780 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col8a1Q00780 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm24263-201ENSMUST00000104059 107 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm15760-201ENSMUST00000119553 283 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm12412-201ENSMUST00000121867 328 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm22447-201ENSMUST00000158155 92 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm26291-201ENSMUST00000158889 137 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm20450-201ENSMUST00000173652 147 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Mir6335-201ENSMUST00000184081 98 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm29429-201ENSMUST00000187071 121 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm28623-201ENSMUST00000187219 192 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm37081-201ENSMUST00000192034 196 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.42□□□□□ -1.86
Col8a1Q00780 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Gm23518-201ENSMUST00000082835 153 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col8a1Q00780 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 408 ms