Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CiitaP79621 Gm15030-201ENSMUST00000119804 484 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm3788-201ENSMUST00000119949 136 ntBASIC2.92□□□□□ -1.94
CiitaP79621 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CiitaP79621 Gm7209-201ENSMUST00000122339 333 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.92□□□□□ -1.94
CiitaP79621 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.92□□□□□ -1.94
CiitaP79621 Gm25153-201ENSMUST00000157118 156 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm22330-201ENSMUST00000158068 115 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm17062-201ENSMUST00000166987 461 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm25476-201ENSMUST00000175125 185 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm23933-201ENSMUST00000178405 79 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm23190-201ENSMUST00000180307 64 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Mir8103-201ENSMUST00000183945 107 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm29184-201ENSMUST00000190038 334 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Gm37807-201ENSMUST00000194310 190 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CiitaP79621 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CiitaP79621 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.92□□□□□ -1.94
CiitaP79621 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.92□□□□□ -1.94
CiitaP79621 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.92□□□□□ -1.94
CiitaP79621 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.92□□□□□ -1.94
CiitaP79621 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.92□□□□□ -1.94
CiitaP79621 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CiitaP79621 Gm26263-201ENSMUST00000083281 164 ntBASIC2.92□□□□□ -1.94
CiitaP79621 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CiitaP79621 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CiitaP79621 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm12793-201ENSMUST00000119268 292 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Gm25808-201ENSMUST00000122784 284 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm22668-201ENSMUST00000158716 260 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Mir7013-201ENSMUST00000183540 72 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Gm27786-201ENSMUST00000184337 70 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm43550-201ENSMUST00000200597 303 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.91□□□□□ -1.94
CiitaP79621 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.91□□□□□ -1.94
CiitaP79621 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.91□□□□□ -1.94
CiitaP79621 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm9174-201ENSMUST00000078149 255 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Gm23247-201ENSMUST00000083373 107 ntBASIC2.91□□□□□ -1.94
CiitaP79621 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CiitaP79621 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CiitaP79621 Gm24068-201ENSMUST00000104513 132 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm26247-201ENSMUST00000116702 91 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm13581-201ENSMUST00000120675 278 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm25945-201ENSMUST00000122484 135 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm20718-201ENSMUST00000176058 259 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm20660-201ENSMUST00000177515 289 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm26335-201ENSMUST00000178449 107 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.9□□□□□ -1.95
CiitaP79621 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.9□□□□□ -1.95
CiitaP79621 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.9□□□□□ -1.95
CiitaP79621 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CiitaP79621 Gm44524-201ENSMUST00000203899 271 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.9□□□□□ -1.95
CiitaP79621 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.9□□□□□ -1.95
CiitaP79621 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CiitaP79621 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.9□□□□□ -1.95
CiitaP79621 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CiitaP79621 Gm23454-201ENSMUST00000083332 133 ntBASIC2.9□□□□□ -1.95
CiitaP79621 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CiitaP79621 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CiitaP79621 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CiitaP79621 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CiitaP79621 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CiitaP79621 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CiitaP79621 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Gm14852-201ENSMUST00000120065 647 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Gm7916-201ENSMUST00000120325 456 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Gm11556-201ENSMUST00000120751 288 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CiitaP79621 Gm14333-201ENSMUST00000130484 264 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Gm24716-201ENSMUST00000157524 104 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Mir6386-201ENSMUST00000183558 104 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Mir6917-201ENSMUST00000184111 61 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.89□□□□□ -1.95
CiitaP79621 Gm44910-201ENSMUST00000208451 396 ntBASIC2.89□□□□□ -1.95
CiitaP79621 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.89□□□□□ -1.95
CiitaP79621 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.89□□□□□ -1.95
CiitaP79621 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CiitaP79621 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Gm10298-201ENSMUST00000074801 265 ntBASIC2.89□□□□□ -1.95
CiitaP79621 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms