Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ufd1P70362 Gm13602-201ENSMUST00000122405 493 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm25052-201ENSMUST00000122661 158 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm25339-201ENSMUST00000157458 232 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm26393-201ENSMUST00000157625 129 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm24601-201ENSMUST00000157970 143 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm22483-201ENSMUST00000157986 274 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm22166-201ENSMUST00000178419 121 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm23288-201ENSMUST00000179213 121 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm22631-201ENSMUST00000179656 94 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm3852-201ENSMUST00000182781 264 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm27490-201ENSMUST00000184754 128 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.06□□□□□ -2.08
Ufd1P70362 Gm18185-201ENSMUST00000186725 667 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.06□□□□□ -2.08
Ufd1P70362 Gm43582-201ENSMUST00000196149 343 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ufd1P70362 Gm44825-201ENSMUST00000207557 150 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm44598-201ENSMUST00000207566 150 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ufd1P70362 Gm26263-201ENSMUST00000083281 164 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Gm22353-201ENSMUST00000083918 136 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ufd1P70362 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.06□□□□□ -2.08
Ufd1P70362 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ufd1P70362 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Ufd1P70362 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ufd1P70362 Gm22771-201ENSMUST00000104449 91 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm15714-201ENSMUST00000117168 250 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm7916-201ENSMUST00000120325 456 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm12006-201ENSMUST00000120786 403 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.05□□□□□ -2.08
Ufd1P70362 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.05□□□□□ -2.08
Ufd1P70362 Gm24745-201ENSMUST00000157840 85 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm23196-201ENSMUST00000158806 107 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.05□□□□□ -2.08
Ufd1P70362 Gm4468-201ENSMUST00000170206 294 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm27660-201ENSMUST00000184028 208 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm44824-201ENSMUST00000207021 229 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm29809-201ENSMUST00000218423 493 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.05□□□□□ -2.08
Ufd1P70362 Gm7065-201ENSMUST00000222150 474 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm35558-203ENSMUST00000222264 204 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm24313-201ENSMUST00000082561 133 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm24044-201ENSMUST00000083107 156 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Gm25628-201ENSMUST00000084002 105 ntBASIC2.05□□□□□ -2.08
Ufd1P70362 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.05□□□□□ -2.08
Ufd1P70362 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Ufd1P70362 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ufd1P70362 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ufd1P70362 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm23422-201ENSMUST00000102000 107 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm25507-201ENSMUST00000116981 144 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm15120-201ENSMUST00000120602 301 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm25321-201ENSMUST00000122558 102 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm25270-201ENSMUST00000122606 138 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm16355-201ENSMUST00000128606 231 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm650-201ENSMUST00000144428 1551 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm23469-201ENSMUST00000157131 104 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm22322-201ENSMUST00000157151 111 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm25280-201ENSMUST00000157269 101 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm24997-201ENSMUST00000157910 105 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm24846-201ENSMUST00000158033 108 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm24212-201ENSMUST00000158258 132 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ufd1P70362 Mir7j-201ENSMUST00000184427 122 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Ufd1P70362 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Gm45252-201ENSMUST00000211579 397 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.04□□□□□ -2.08
Ufd1P70362 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.04□□□□□ -2.08
Ufd1P70362 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Ufd1P70362 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Ufd1P70362 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm26075-201ENSMUST00000104062 121 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm25764-201ENSMUST00000104092 134 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm22590-201ENSMUST00000104247 128 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm22494-201ENSMUST00000104495 128 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm13331-201ENSMUST00000117500 448 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms