Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm22657-201ENSMUST00000104197 132 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm26387-201ENSMUST00000104238 132 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm6897-201ENSMUST00000117714 138 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm14758-201ENSMUST00000119104 138 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm13737-201ENSMUST00000119793 232 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm14845-201ENSMUST00000121259 306 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm25805-201ENSMUST00000122788 108 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm10444-201ENSMUST00000126708 148 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm23753-201ENSMUST00000157575 149 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm23219-201ENSMUST00000158123 87 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm24976-201ENSMUST00000158972 135 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sf3b6P59708 Mir6371-201ENSMUST00000184470 111 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm30341-201ENSMUST00000194363 289 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm43704-201ENSMUST00000196164 496 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm9238-201ENSMUST00000196181 329 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Gm45553-201ENSMUST00000209929 507 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sf3b6P59708 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sf3b6P59708 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sf3b6P59708 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sf3b6P59708 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sf3b6P59708 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm25421-201ENSMUST00000104218 164 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm25783-201ENSMUST00000122525 190 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm25543-201ENSMUST00000122678 312 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm23331-201ENSMUST00000157423 108 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm25913-201ENSMUST00000157617 135 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm15796-201ENSMUST00000162135 204 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm22286-201ENSMUST00000179708 107 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm27899-201ENSMUST00000184715 64 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm28825-201ENSMUST00000186233 238 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm18429-201ENSMUST00000198707 421 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm44385-201ENSMUST00000198781 81 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm23875-201ENSMUST00000083711 318 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm23850-201ENSMUST00000083830 169 ntBASIC3.6□□□□□ -1.83
Sf3b6P59708 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sf3b6P59708 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sf3b6P59708 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sf3b6P59708 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sf3b6P59708 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm23948-201ENSMUST00000104030 132 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm24855-201ENSMUST00000104848 97 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Mir1b-201ENSMUST00000117012 122 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm12934-201ENSMUST00000119221 343 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm14922-201ENSMUST00000121131 163 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm23002-201ENSMUST00000179221 107 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm27883-201ENSMUST00000183941 102 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm29104-201ENSMUST00000186304 222 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm6802-202ENSMUST00000186566 126 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm29022-201ENSMUST00000190702 225 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm45907-201ENSMUST00000213023 193 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.59□□□□□ -1.83
Sf3b6P59708 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm46998-201ENSMUST00000221444 330 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.59□□□□□ -1.83
Sf3b6P59708 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm25856-201ENSMUST00000082786 75 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Gm26327-201ENSMUST00000093724 111 ntBASIC3.59□□□□□ -1.83
Sf3b6P59708 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sf3b6P59708 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
Sf3b6P59708 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Sf3b6P59708 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.59□□□□□ -1.84
Sf3b6P59708 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sf3b6P59708 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms