Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm29573-201ENSMUST00000190291 919 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm44720-201ENSMUST00000206076 260 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cux1P53564 Gm29920-201ENSMUST00000206876 754 ntBASIC1.49□□□□□ -2.17
Cux1P53564 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cux1P53564 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cux1P53564 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Cux1P53564 Gm23708-201ENSMUST00000104367 123 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Mir208b-201ENSMUST00000104735 77 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm15281-201ENSMUST00000125181 351 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm26101-201ENSMUST00000157246 105 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm23120-201ENSMUST00000157654 287 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm22389-201ENSMUST00000158193 301 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Cux1P53564 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Cux1P53564 Mir3473a-201ENSMUST00000175011 78 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm25996-201ENSMUST00000175393 117 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm24925-201ENSMUST00000178157 107 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm25312-201ENSMUST00000178972 107 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cux1P53564 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.48□□□□□ -2.17
Cux1P53564 Gm37576-201ENSMUST00000194228 372 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Cux1P53564 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cux1P53564 Gm26439-201ENSMUST00000082592 106 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm22293-201ENSMUST00000083314 109 ntBASIC1.48□□□□□ -2.17
Cux1P53564 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cux1P53564 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Mir873a-201ENSMUST00000104863 77 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm15113-201ENSMUST00000119280 836 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm4916-201ENSMUST00000126139 642 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm23137-201ENSMUST00000157559 107 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm8207-201ENSMUST00000171204 502 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm24086-201ENSMUST00000175171 98 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm21885-201ENSMUST00000178891 327 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm7329-201ENSMUST00000185915 210 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.47□□□□□ -2.17
Cux1P53564 Gm29263-201ENSMUST00000188718 463 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm28384-201ENSMUST00000189079 463 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.47□□□□□ -2.17
Cux1P53564 Gm43865-201ENSMUST00000204721 127 ntBASIC1.47□□□□□ -2.17
Cux1P53564 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cux1P53564 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cux1P53564 Gm15215-201ENSMUST00000117773 489 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm14363-201ENSMUST00000122304 409 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.46□□□□□ -2.18
Cux1P53564 Gm25730-201ENSMUST00000178753 165 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cux1P53564 Gm27511-201ENSMUST00000183502 127 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm33866-201ENSMUST00000196911 289 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm8041-201ENSMUST00000199755 616 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm23932-201ENSMUST00000082914 107 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm25792-201ENSMUST00000083289 100 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.46□□□□□ -2.18
Cux1P53564 Gm25647-201ENSMUST00000101832 78 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm25823-201ENSMUST00000101995 78 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm14517-201ENSMUST00000119040 337 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm23704-201ENSMUST00000158844 340 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm15508-201ENSMUST00000160330 325 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm24220-201ENSMUST00000177753 79 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm25988-201ENSMUST00000177759 79 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms