Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.94□□□□□ -1.94
Traf1P39428 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Traf1P39428 Gm14362-201ENSMUST00000121679 273 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm11358-201ENSMUST00000122310 373 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm15077-201ENSMUST00000122344 362 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.93□□□□□ -1.94
Traf1P39428 Gm15254-201ENSMUST00000149567 273 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm24436-201ENSMUST00000157889 302 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Mir5099-201ENSMUST00000175257 74 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Traf1P39428 Trbv7-201ENSMUST00000193339 402 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm19032-201ENSMUST00000208584 592 ntBASIC2.93□□□□□ -1.94
Traf1P39428 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.93□□□□□ -1.94
Traf1P39428 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.93□□□□□ -1.94
Traf1P39428 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.93□□□□□ -1.94
Traf1P39428 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Traf1P39428 Gm24670-201ENSMUST00000104154 132 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm13876-201ENSMUST00000118451 261 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm23212-201ENSMUST00000122718 60 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.92□□□□□ -1.94
Traf1P39428 Gm25863-201ENSMUST00000158249 329 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.92□□□□□ -1.94
Traf1P39428 Gm23144-201ENSMUST00000180226 107 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm5329-201ENSMUST00000186898 463 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.92□□□□□ -1.94
Traf1P39428 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm10298-201ENSMUST00000074801 265 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Traf1P39428 Mir423-201ENSMUST00000083584 109 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Gm26166-201ENSMUST00000083788 107 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Traf1P39428 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Traf1P39428 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Traf1P39428 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.92□□□□□ -1.94
Traf1P39428 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
Traf1P39428 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Traf1P39428 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
Traf1P39428 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Traf1P39428 Gm13355-201ENSMUST00000117996 317 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Gm15497-201ENSMUST00000119137 551 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Gm24075-201ENSMUST00000158175 72 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Gm24358-201ENSMUST00000158424 288 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Traf1P39428 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Traf1P39428 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.91□□□□□ -1.94
Traf1P39428 Gm24315-201ENSMUST00000177835 127 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Mir7667-201ENSMUST00000183866 63 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.91□□□□□ -1.94
Traf1P39428 Gm43550-201ENSMUST00000200597 303 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Gm45678-201ENSMUST00000210509 295 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Traf1P39428 Gm24268-201ENSMUST00000082990 110 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Olfr575-201ENSMUST00000084812 957 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Traf1P39428 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Traf1P39428 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.91□□□□□ -1.94
Traf1P39428 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Traf1P39428 Gm22779-201ENSMUST00000104085 107 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm24274-201ENSMUST00000116787 124 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm14852-201ENSMUST00000120065 647 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm15529-201ENSMUST00000121833 994 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm23889-201ENSMUST00000122689 104 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.9□□□□□ -1.95
Traf1P39428 Gm24771-201ENSMUST00000158508 137 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm16232-201ENSMUST00000162856 167 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm38311-201ENSMUST00000192945 165 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm45071-201ENSMUST00000205353 571 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Gm24045-201ENSMUST00000083113 98 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Snord7-201ENSMUST00000083781 97 ntBASIC2.9□□□□□ -1.95
Traf1P39428 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Traf1P39428 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Traf1P39428 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Traf1P39428 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Traf1P39428 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Traf1P39428 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Traf1P39428 Mir687-201ENSMUST00000102166 89 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Traf1P39428 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm26186-201ENSMUST00000157689 125 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm20543-201ENSMUST00000174200 726 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm24813-201ENSMUST00000175310 84 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm11392-201ENSMUST00000181419 710 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.89□□□□□ -1.95
Traf1P39428 Gm42509-201ENSMUST00000197390 781 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm43286-201ENSMUST00000197420 424 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms