Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cd40lgP27548 Gm25586-201ENSMUST00000082499 112 ntBASIC2.23□□□□□ -2.05
Cd40lgP27548 Snord7-201ENSMUST00000083781 97 ntBASIC2.23□□□□□ -2.05
Cd40lgP27548 Gm13806-201ENSMUST00000117822 325 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm13880-201ENSMUST00000118421 474 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm12513-201ENSMUST00000118617 352 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm13804-201ENSMUST00000119552 172 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm11835-201ENSMUST00000120635 663 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm9225-201ENSMUST00000121921 836 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm14366-201ENSMUST00000121970 730 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm22851-201ENSMUST00000178741 94 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm25074-201ENSMUST00000178782 94 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Mir7j-201ENSMUST00000184427 122 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Mir6363-201ENSMUST00000184880 114 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm29335-201ENSMUST00000188361 459 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm43402-201ENSMUST00000197159 159 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Mir7232-201ENSMUST00000197929 74 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.22□□□□□ -2.05
Cd40lgP27548 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.22□□□□□ -2.05
Cd40lgP27548 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cd40lgP27548 Mir127-201ENSMUST00000093568 70 ntBASIC2.22□□□□□ -2.05
Cd40lgP27548 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cd40lgP27548 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.22□□□□□ -2.05
Cd40lgP27548 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Cd40lgP27548 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.05
Cd40lgP27548 Gm26147-201ENSMUST00000104479 114 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm14073-201ENSMUST00000117344 381 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm13756-201ENSMUST00000117618 222 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm5287-201ENSMUST00000120666 598 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm14362-201ENSMUST00000121679 273 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm14765-201ENSMUST00000121954 326 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm25052-201ENSMUST00000122661 158 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm15254-201ENSMUST00000149567 273 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Cd40lgP27548 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm24315-201ENSMUST00000177835 127 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm22633-201ENSMUST00000179834 107 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm29429-201ENSMUST00000187071 121 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Trbv22-201ENSMUST00000191697 291 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm42647-201ENSMUST00000195939 459 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm43722-201ENSMUST00000196054 124 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.21□□□□□ -2.06
Cd40lgP27548 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.21□□□□□ -2.06
Cd40lgP27548 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cd40lgP27548 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Cd40lgP27548 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cd40lgP27548 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.2□□□□□ -2.06
Cd40lgP27548 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm12096-201ENSMUST00000121149 829 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm13602-201ENSMUST00000122405 493 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm23600-201ENSMUST00000157260 71 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm22554-201ENSMUST00000157798 147 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm24212-201ENSMUST00000158258 132 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm23059-201ENSMUST00000158978 107 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm22131-201ENSMUST00000178415 94 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Mir7014-201ENSMUST00000183853 63 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm19193-201ENSMUST00000190263 590 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm37557-201ENSMUST00000191640 139 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm19694-201ENSMUST00000192364 505 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm18964-201ENSMUST00000193013 563 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm17906-201ENSMUST00000202480 901 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm44011-201ENSMUST00000203336 394 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm19118-201ENSMUST00000222554 98 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm5374-201ENSMUST00000222868 657 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.2□□□□□ -2.06
Cd40lgP27548 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm25257-201ENSMUST00000083907 110 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.2□□□□□ -2.06
Cd40lgP27548 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Cd40lgP27548 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.19□□□□□ -2.06
Cd40lgP27548 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cd40lgP27548 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Cd40lgP27548 Gm26015-201ENSMUST00000104402 125 ntBASIC2.19□□□□□ -2.06
Cd40lgP27548 Gm22771-201ENSMUST00000104449 91 ntBASIC2.19□□□□□ -2.06
Cd40lgP27548 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Cd40lgP27548 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms