Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.07□□□□□ -2.08
P20040 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.07□□□□□ -2.08
P20040 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.07□□□□□ -2.08
P20040 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.07□□□□□ -2.08
P20040 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.07□□□□□ -2.08
P20040 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
P20040 Gm22443-201ENSMUST00000082890 107 ntBASIC2.07□□□□□ -2.08
P20040 Mir127-201ENSMUST00000093568 70 ntBASIC2.07□□□□□ -2.08
P20040 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
P20040 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.07□□□□□ -2.08
P20040 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.07□□□□□ -2.08
P20040 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
P20040 Gm12765-201ENSMUST00000117273 615 ntBASIC2.06□□□□□ -2.08
P20040 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
P20040 Gm15183-201ENSMUST00000118933 348 ntBASIC2.06□□□□□ -2.08
P20040 Gm14852-201ENSMUST00000120065 647 ntBASIC2.06□□□□□ -2.08
P20040 Gm13368-201ENSMUST00000122443 430 ntBASIC2.06□□□□□ -2.08
P20040 Gm23889-201ENSMUST00000122689 104 ntBASIC2.06□□□□□ -2.08
P20040 Gm22382-201ENSMUST00000158185 130 ntBASIC2.06□□□□□ -2.08
P20040 Gm24056-201ENSMUST00000158617 146 ntBASIC2.06□□□□□ -2.08
P20040 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.06□□□□□ -2.08
P20040 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.06□□□□□ -2.08
P20040 Gm24304-201ENSMUST00000177635 107 ntBASIC2.06□□□□□ -2.08
P20040 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.06□□□□□ -2.08
P20040 Gm28926-201ENSMUST00000191063 680 ntBASIC2.06□□□□□ -2.08
P20040 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.06□□□□□ -2.08
P20040 Gm19694-201ENSMUST00000192364 505 ntBASIC2.06□□□□□ -2.08
P20040 Trbv6-201ENSMUST00000193743 276 ntBASIC2.06□□□□□ -2.08
P20040 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.06□□□□□ -2.08
P20040 Gm42739-201ENSMUST00000200687 226 ntBASIC2.06□□□□□ -2.08
P20040 Gm44161-201ENSMUST00000203532 253 ntBASIC2.06□□□□□ -2.08
P20040 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.06□□□□□ -2.08
P20040 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.06□□□□□ -2.08
P20040 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.06□□□□□ -2.08
P20040 Snord104-201ENSMUST00000083192 70 ntBASIC2.06□□□□□ -2.08
P20040 Olfr575-201ENSMUST00000084812 957 ntBASIC2.06□□□□□ -2.08
P20040 Gm26327-201ENSMUST00000093724 111 ntBASIC2.06□□□□□ -2.08
P20040 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
P20040 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
P20040 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P20040 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
P20040 Gm24274-201ENSMUST00000116787 124 ntBASIC2.05□□□□□ -2.08
P20040 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.05□□□□□ -2.08
P20040 Gm13862-201ENSMUST00000121220 197 ntBASIC2.05□□□□□ -2.08
P20040 Gm14765-201ENSMUST00000121954 326 ntBASIC2.05□□□□□ -2.08
P20040 Gm12443-201ENSMUST00000122308 323 ntBASIC2.05□□□□□ -2.08
P20040 Gm24210-201ENSMUST00000158263 133 ntBASIC2.05□□□□□ -2.08
P20040 Gm23476-201ENSMUST00000158881 274 ntBASIC2.05□□□□□ -2.08
P20040 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
P20040 Gm6660-201ENSMUST00000179149 468 ntBASIC2.05□□□□□ -2.08
P20040 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.05□□□□□ -2.08
P20040 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.05□□□□□ -2.08
P20040 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.05□□□□□ -2.08
P20040 Gm2628-201ENSMUST00000218019 426 ntBASIC2.05□□□□□ -2.08
P20040 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.05□□□□□ -2.08
P20040 Gm5374-201ENSMUST00000222868 657 ntBASIC2.05□□□□□ -2.08
P20040 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.05□□□□□ -2.08
P20040 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P20040 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.05□□□□□ -2.08
P20040 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.04□□□□□ -2.08
P20040 Gm13331-201ENSMUST00000117500 448 ntBASIC2.04□□□□□ -2.08
P20040 Gm14793-201ENSMUST00000118739 311 ntBASIC2.04□□□□□ -2.08
P20040 Gm26424-201ENSMUST00000122530 104 ntBASIC2.04□□□□□ -2.08
P20040 Gm16355-201ENSMUST00000128606 231 ntBASIC2.04□□□□□ -2.08
P20040 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.04□□□□□ -2.08
P20040 Gm23981-201ENSMUST00000157136 106 ntBASIC2.04□□□□□ -2.08
P20040 Gm22517-201ENSMUST00000158265 136 ntBASIC2.04□□□□□ -2.08
P20040 Gm23005-201ENSMUST00000158950 136 ntBASIC2.04□□□□□ -2.08
P20040 Gm8292-201ENSMUST00000162574 396 ntBASIC2.04□□□□□ -2.08
P20040 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.04□□□□□ -2.08
P20040 Mir5101-201ENSMUST00000175181 83 ntBASIC2.04□□□□□ -2.08
P20040 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
P20040 Mir6370-201ENSMUST00000183510 120 ntBASIC2.04□□□□□ -2.08
P20040 Mir7062-201ENSMUST00000185038 66 ntBASIC2.04□□□□□ -2.08
P20040 Gm10193-201ENSMUST00000188288 231 ntBASIC2.04□□□□□ -2.08
P20040 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.04□□□□□ -2.08
P20040 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.04□□□□□ -2.08
P20040 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.04□□□□□ -2.08
P20040 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.04□□□□□ -2.08
P20040 Gm7065-201ENSMUST00000222150 474 ntBASIC2.04□□□□□ -2.08
P20040 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.04□□□□□ -2.08
P20040 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
P20040 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
P20040 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.04□□□□□ -2.08
P20040 Gm22229-201ENSMUST00000082987 108 ntBASIC2.04□□□□□ -2.08
P20040 Gm24661-201ENSMUST00000083205 104 ntBASIC2.04□□□□□ -2.08
P20040 Snord14d-201ENSMUST00000083424 86 ntBASIC2.04□□□□□ -2.08
P20040 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
P20040 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.04□□□□□ -2.08
P20040 Gm22752-201ENSMUST00000102083 109 ntBASIC2.03□□□□□ -2.08
P20040 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.03□□□□□ -2.08
P20040 Gm25863-201ENSMUST00000158249 329 ntBASIC2.03□□□□□ -2.08
P20040 Gm23352-201ENSMUST00000158428 64 ntBASIC2.03□□□□□ -2.08
P20040 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.03□□□□□ -2.08
P20040 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.03□□□□□ -2.08
P20040 Gm27753-201ENSMUST00000184742 203 ntBASIC2.03□□□□□ -2.08
P20040 Gm28838-201ENSMUST00000186338 315 ntBASIC2.03□□□□□ -2.08
P20040 Gm29604-201ENSMUST00000187176 163 ntBASIC2.03□□□□□ -2.08
P20040 Gm29635-201ENSMUST00000187221 315 ntBASIC2.03□□□□□ -2.08
P20040 Gm29026-201ENSMUST00000187787 315 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms