Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23713-201ENSMUST00000157353 70 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm23332-201ENSMUST00000157424 275 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm23752-201ENSMUST00000157584 115 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm22615-201ENSMUST00000158102 70 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm24879-201ENSMUST00000158386 143 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm22011-201ENSMUST00000158790 123 ntBASIC2.5□□□□□ -2.01
Lire1P11260 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm27991-201ENSMUST00000184804 137 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.5□□□□□ -2.01
Lire1P11260 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.5□□□□□ -2.01
Lire1P11260 Gm23128-202ENSMUST00000196578 133 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm42672-201ENSMUST00000197821 352 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm45452-201ENSMUST00000210905 177 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm18160-201ENSMUST00000214279 827 ntBASIC2.5□□□□□ -2.01
Lire1P11260 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm23517-201ENSMUST00000082830 192 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Mir300-201ENSMUST00000083485 79 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.5□□□□□ -2.01
Lire1P11260 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lire1P11260 Mir687-201ENSMUST00000102166 89 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm14897-201ENSMUST00000118213 207 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm12235-201ENSMUST00000118596 170 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm15659-201ENSMUST00000118881 341 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm25325-201ENSMUST00000122559 86 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm24358-201ENSMUST00000158424 288 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm25711-201ENSMUST00000158633 128 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm17166-201ENSMUST00000172006 431 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm18396-201ENSMUST00000177095 361 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm27028-201ENSMUST00000182303 399 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Mir7242-201ENSMUST00000183710 79 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm27722-201ENSMUST00000183908 76 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.49□□□□□ -2.01
Lire1P11260 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm8747-201ENSMUST00000195392 751 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm43004-201ENSMUST00000201872 703 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm29848-201ENSMUST00000203107 295 ntBASIC2.49□□□□□ -2.01
Lire1P11260 Gm43865-201ENSMUST00000204721 127 ntBASIC2.49□□□□□ -2.01
Lire1P11260 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.49□□□□□ -2.01
Lire1P11260 Gm2436-201ENSMUST00000219562 774 ntBASIC2.49□□□□□ -2.01
Lire1P11260 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.49□□□□□ -2.01
Lire1P11260 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.49□□□□□ -2.01
Lire1P11260 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Lire1P11260 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Lire1P11260 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.48□□□□□ -2.01
Lire1P11260 Mdga2-203ENSMUST00000113942 423 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm14894-201ENSMUST00000117170 270 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.48□□□□□ -2.01
Lire1P11260 DQ267100-201ENSMUST00000122600 72 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm23111-201ENSMUST00000122652 105 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm24198-201ENSMUST00000157812 108 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm24439-201ENSMUST00000157894 117 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm15900-201ENSMUST00000161584 342 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm25528-201ENSMUST00000180264 132 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm37449-201ENSMUST00000193016 270 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm18658-201ENSMUST00000195558 270 ntBASIC2.48□□□□□ -2.01
Lire1P11260 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Lire1P11260 Gm42807-201ENSMUST00000200141 329 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Gm45730-201ENSMUST00000212560 395 ntBASIC2.48□□□□□ -2.01
Lire1P11260 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Lire1P11260 Gm25788-201ENSMUST00000082721 131 ntBASIC2.48□□□□□ -2.01
Lire1P11260 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Lire1P11260 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Lire1P11260 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Lire1P11260 Gm12598-201ENSMUST00000117333 830 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm15175-201ENSMUST00000117629 132 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm15215-201ENSMUST00000117773 489 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm24922-201ENSMUST00000158511 102 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm25488-201ENSMUST00000158728 118 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm23196-201ENSMUST00000158806 107 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm22500-201ENSMUST00000158982 99 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm21978-201ENSMUST00000179696 377 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm3724-201ENSMUST00000197957 349 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm44320-201ENSMUST00000199276 86 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm42475-201ENSMUST00000201212 295 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm19032-201ENSMUST00000208584 592 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm45386-201ENSMUST00000210194 218 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Lire1P11260 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.47□□□□□ -2.01
Lire1P11260 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Lire1P11260 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Mir301-201ENSMUST00000083655 86 ntBASIC2.47□□□□□ -2.01
Lire1P11260 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.47□□□□□ -2.01
Lire1P11260 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Lire1P11260 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.47□□□□□ -2.01
Lire1P11260 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.47□□□□□ -2.01
Lire1P11260 Gm11935-201ENSMUST00000118608 399 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm15272-201ENSMUST00000120865 233 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm24517-201ENSMUST00000122560 107 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm23980-201ENSMUST00000157135 158 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm24291-201ENSMUST00000157633 162 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm24768-201ENSMUST00000158512 94 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm22947-201ENSMUST00000158559 91 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms