Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.24□□□□□ -1.89
Lmx1bO88609 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.24□□□□□ -1.89
Lmx1bO88609 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.24□□□□□ -1.89
Lmx1bO88609 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lmx1bO88609 Snora70-201ENSMUST00000083047 137 ntBASIC3.24□□□□□ -1.89
Lmx1bO88609 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lmx1bO88609 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.24□□□□□ -1.89
Lmx1bO88609 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lmx1bO88609 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lmx1bO88609 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm24640-201ENSMUST00000116949 126 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm22626-201ENSMUST00000116990 126 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm13967-201ENSMUST00000120404 380 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm6565-201ENSMUST00000121217 438 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm23326-201ENSMUST00000157419 105 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm23667-201ENSMUST00000157466 120 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm25860-201ENSMUST00000158252 126 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm24761-201ENSMUST00000179589 127 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm24488-201ENSMUST00000179934 127 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm25701-201ENSMUST00000179988 127 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm26431-201ENSMUST00000180199 127 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm27699-201ENSMUST00000183553 180 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Mir6335-201ENSMUST00000184081 98 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm29429-201ENSMUST00000187071 121 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm28744-201ENSMUST00000189939 340 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm28314-201ENSMUST00000191276 345 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm18384-201ENSMUST00000195974 808 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm45315-201ENSMUST00000209283 333 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm21007-201ENSMUST00000221024 326 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm26497-201ENSMUST00000083146 107 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm22169-201ENSMUST00000083229 107 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm26066-201ENSMUST00000083385 109 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Mir101b-201ENSMUST00000083622 97 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm26329-201ENSMUST00000093723 110 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm8074-201ENSMUST00000095071 252 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lmx1bO88609 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lmx1bO88609 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Lmx1bO88609 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.23□□□□□ -1.89
Lmx1bO88609 Mir673-201ENSMUST00000102361 91 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm22115-201ENSMUST00000103976 133 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm23923-201ENSMUST00000104108 133 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm13329-201ENSMUST00000117063 265 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm13457-201ENSMUST00000117885 267 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm14768-201ENSMUST00000122126 678 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm25967-201ENSMUST00000157168 147 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm24914-201ENSMUST00000157285 313 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm22380-201ENSMUST00000157479 95 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm22336-201ENSMUST00000157719 107 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm22389-201ENSMUST00000158193 301 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm24552-201ENSMUST00000158646 103 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm23860-201ENSMUST00000179446 132 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Mir7062-201ENSMUST00000185038 66 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm29262-201ENSMUST00000190084 196 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm7182-201ENSMUST00000193351 732 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm38060-201ENSMUST00000194822 464 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm9379-201ENSMUST00000196790 646 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm2189-201ENSMUST00000201419 429 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Mir21a-201ENSMUST00000083521 92 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Lmx1bO88609 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lmx1bO88609 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Lmx1bO88609 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.22□□□□□ -1.89
Lmx1bO88609 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lmx1bO88609 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Lmx1bO88609 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm22936-201ENSMUST00000103955 126 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Snord72-201ENSMUST00000104549 81 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm23887-201ENSMUST00000122683 172 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Lmx1bO88609 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Lmx1bO88609 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm23829-201ENSMUST00000157392 270 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm22611-201ENSMUST00000158288 150 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Lmx1bO88609 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm27535-201ENSMUST00000183814 157 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm43529-201ENSMUST00000199178 412 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm44844-201ENSMUST00000207242 336 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm45513-201ENSMUST00000210228 376 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.21□□□□□ -1.9
Lmx1bO88609 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Lmx1bO88609 Gm10088-201ENSMUST00000074116 423 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms