Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm43083-201ENSMUST00000199594 476 ntBASIC1.93□□□□□ -2.1
BckdkO55028 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.93□□□□□ -2.1
BckdkO55028 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.93□□□□□ -2.1
BckdkO55028 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.93□□□□□ -2.1
BckdkO55028 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.93□□□□□ -2.1
BckdkO55028 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.93□□□□□ -2.1
BckdkO55028 Gm24044-201ENSMUST00000083107 156 ntBASIC1.93□□□□□ -2.1
BckdkO55028 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
BckdkO55028 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
BckdkO55028 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
BckdkO55028 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm23951-201ENSMUST00000104029 132 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm13728-201ENSMUST00000117471 400 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm15167-201ENSMUST00000121997 187 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
BckdkO55028 Gm22527-201ENSMUST00000158816 106 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm28825-201ENSMUST00000186233 238 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm5329-201ENSMUST00000186898 463 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Trbv18-201ENSMUST00000194256 294 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm44395-201ENSMUST00000197056 153 ntBASIC1.92□□□□□ -2.1
BckdkO55028 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.92□□□□□ -2.1
BckdkO55028 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.92□□□□□ -2.1
BckdkO55028 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.92□□□□□ -2.1
BckdkO55028 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
BckdkO55028 Mir1192-201ENSMUST00000116976 121 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm12765-201ENSMUST00000117273 615 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm12656-201ENSMUST00000118149 577 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm14748-201ENSMUST00000119819 411 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm13588-201ENSMUST00000120026 135 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm13602-201ENSMUST00000122405 493 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm24857-201ENSMUST00000158061 310 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BckdkO55028 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BckdkO55028 Gm23813-201ENSMUST00000175153 77 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm24897-201ENSMUST00000179033 107 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Mir6406-201ENSMUST00000183592 120 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Mir8090-201ENSMUST00000185078 136 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm6059-201ENSMUST00000196903 340 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm23370-202ENSMUST00000197008 129 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Mir7217-201ENSMUST00000200304 62 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
BckdkO55028 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.91□□□□□ -2.1
BckdkO55028 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.91□□□□□ -2.1
BckdkO55028 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.91□□□□□ -2.1
BckdkO55028 Gm22978-201ENSMUST00000082607 160 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Gm22443-201ENSMUST00000082890 107 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Mir30d-201ENSMUST00000083503 82 ntBASIC1.91□□□□□ -2.1
BckdkO55028 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
BckdkO55028 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BckdkO55028 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
BckdkO55028 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
BckdkO55028 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm15183-201ENSMUST00000118933 348 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm23885-201ENSMUST00000122682 294 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.9□□□□□ -2.11
BckdkO55028 Gm24784-201ENSMUST00000157640 62 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm22803-201ENSMUST00000158049 283 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Mir6335-201ENSMUST00000184081 98 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm28838-201ENSMUST00000186338 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm29635-201ENSMUST00000187221 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm29026-201ENSMUST00000187787 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.9□□□□□ -2.11
BckdkO55028 Gm28797-201ENSMUST00000188543 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm28855-201ENSMUST00000188680 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm28705-201ENSMUST00000189548 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm28939-201ENSMUST00000190351 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm28223-201ENSMUST00000190469 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Gm29092-201ENSMUST00000190768 315 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.9□□□□□ -2.11
BckdkO55028 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.9□□□□□ -2.11
BckdkO55028 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
BckdkO55028 Gm43978-201ENSMUST00000203491 451 ntBASIC1.9□□□□□ -2.11
BckdkO55028 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.9□□□□□ -2.11
BckdkO55028 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
BckdkO55028 Gm10298-201ENSMUST00000074801 265 ntBASIC1.9□□□□□ -2.11
BckdkO55028 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
BckdkO55028 Gm14894-201ENSMUST00000117170 270 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm14670-201ENSMUST00000117327 337 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Trav20-201ENSMUST00000142754 347 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.89□□□□□ -2.11
BckdkO55028 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.89□□□□□ -2.11
BckdkO55028 Gm25460-201ENSMUST00000157954 127 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm6660-201ENSMUST00000179149 468 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.89□□□□□ -2.11
BckdkO55028 Gm5116-201ENSMUST00000187732 463 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm29627-201ENSMUST00000187984 463 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm37449-201ENSMUST00000193016 270 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm38238-201ENSMUST00000194334 346 ntBASIC1.89□□□□□ -2.11
BckdkO55028 Gm18658-201ENSMUST00000195558 270 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms