Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm5329-201ENSMUST00000186898 463 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Cldn5O54942 Gm10298-201ENSMUST00000074801 265 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 Gm9174-201ENSMUST00000078149 255 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 Gm26166-201ENSMUST00000083788 107 ntBASIC2.59□□□□□ -1.99
Cldn5O54942 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Cldn5O54942 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.59□□□□□ -2
Cldn5O54942 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Cldn5O54942 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cldn5O54942 Gm24889-201ENSMUST00000104388 132 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cldn5O54942 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Cldn5O54942 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.58□□□□□ -2
Cldn5O54942 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.58□□□□□ -2
Cldn5O54942 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.58□□□□□ -2
Cldn5O54942 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm14852-201ENSMUST00000120065 647 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm23429-201ENSMUST00000122486 149 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm24780-201ENSMUST00000157635 143 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm24212-201ENSMUST00000158258 132 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm15914-201ENSMUST00000161922 309 ntBASIC2.58□□□□□ -2
Cldn5O54942 Mir3092-201ENSMUST00000174954 96 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm22166-201ENSMUST00000178419 121 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm23288-201ENSMUST00000179213 121 ntBASIC2.58□□□□□ -2
Cldn5O54942 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.58□□□□□ -2
Cldn5O54942 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.58□□□□□ -2
Cldn5O54942 Mir7667-201ENSMUST00000183866 63 ntBASIC2.58□□□□□ -2
Cldn5O54942 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm42818-201ENSMUST00000198869 987 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.58□□□□□ -2
Cldn5O54942 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.58□□□□□ -2
Cldn5O54942 Gm44903-201ENSMUST00000206840 130 ntBASIC2.58□□□□□ -2
Cldn5O54942 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.58□□□□□ -2
Cldn5O54942 Gm5374-201ENSMUST00000222868 657 ntBASIC2.58□□□□□ -2
Cldn5O54942 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cldn5O54942 Gm6030-201ENSMUST00000078768 402 ntBASIC2.58□□□□□ -2
Cldn5O54942 Olfr575-201ENSMUST00000084812 957 ntBASIC2.58□□□□□ -2
Cldn5O54942 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cldn5O54942 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Cldn5O54942 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cldn5O54942 Mir542-201ENSMUST00000102186 85 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm13756-201ENSMUST00000117618 222 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm8260-201ENSMUST00000119230 353 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm12806-201ENSMUST00000119384 268 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm13720-201ENSMUST00000120741 196 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm12748-201ENSMUST00000120763 504 ntBASIC2.57□□□□□ -2
Cldn5O54942 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cldn5O54942 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Cldn5O54942 Mir5099-201ENSMUST00000175257 74 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm23862-201ENSMUST00000180342 94 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm27220-201ENSMUST00000183453 262 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm29073-201ENSMUST00000185563 664 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm29165-201ENSMUST00000190655 664 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm29211-201ENSMUST00000191470 664 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm30341-201ENSMUST00000194363 289 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.57□□□□□ -2
Cldn5O54942 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm44060-201ENSMUST00000204440 410 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.57□□□□□ -2
Cldn5O54942 Gm18774-201ENSMUST00000218269 601 ntBASIC2.57□□□□□ -2
Cldn5O54942 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.57□□□□□ -2
Cldn5O54942 Gm23847-201ENSMUST00000083829 110 ntBASIC2.57□□□□□ -2
Cldn5O54942 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Cldn5O54942 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Cldn5O54942 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cldn5O54942 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.56□□□□□ -2
Cldn5O54942 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.56□□□□□ -2
Cldn5O54942 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.56□□□□□ -2
Cldn5O54942 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm13862-201ENSMUST00000121220 197 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm12443-201ENSMUST00000122308 323 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.56□□□□□ -2
Cldn5O54942 Gm24911-201ENSMUST00000157292 136 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm23752-201ENSMUST00000157584 115 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm26186-201ENSMUST00000157689 125 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm25866-201ENSMUST00000158245 112 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
Cldn5O54942 Mir6405-201ENSMUST00000184584 124 ntBASIC2.56□□□□□ -2
Cldn5O54942 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm28825-201ENSMUST00000186233 238 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm28356-202ENSMUST00000187566 858 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm20885-201ENSMUST00000190192 654 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm36866-201ENSMUST00000193343 657 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm36047-201ENSMUST00000193659 657 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm20857-201ENSMUST00000194766 657 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm20858-201ENSMUST00000195459 657 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm23370-202ENSMUST00000197008 129 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm43286-201ENSMUST00000197420 424 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm44256-201ENSMUST00000203304 335 ntBASIC2.56□□□□□ -2
Cldn5O54942 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.56□□□□□ -2
Cldn5O54942 Gm35558-203ENSMUST00000222264 204 ntBASIC2.56□□□□□ -2
Cldn5O54942 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.56□□□□□ -2
Cldn5O54942 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.56□□□□□ -2
Cldn5O54942 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.56□□□□□ -2
Cldn5O54942 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cldn5O54942 Gm23454-201ENSMUST00000083332 133 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms