Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm10161-201ENSMUST00000091506 204 ntBASIC3.73□□□□□ -1.81
Nedd9O35177 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Nedd9O35177 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
Nedd9O35177 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nedd9O35177 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.73□□□□□ -1.81
Nedd9O35177 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm23175-201ENSMUST00000104371 132 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm15026-201ENSMUST00000119219 458 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm14841-201ENSMUST00000121067 758 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm23602-201ENSMUST00000157258 132 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm24061-201ENSMUST00000157489 120 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm26141-201ENSMUST00000175299 126 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm4761-201ENSMUST00000178086 582 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Mir195b-201ENSMUST00000184814 97 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm37715-201ENSMUST00000193206 235 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm42832-201ENSMUST00000196361 745 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm43155-201ENSMUST00000202661 494 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm45403-201ENSMUST00000209453 276 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.72□□□□□ -1.81
Nedd9O35177 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm25410-201ENSMUST00000083758 137 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.72□□□□□ -1.81
Nedd9O35177 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nedd9O35177 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nedd9O35177 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.71□□□□□ -1.81
Nedd9O35177 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nedd9O35177 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Nedd9O35177 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Nedd9O35177 Gm22936-201ENSMUST00000103955 126 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm14825-201ENSMUST00000113538 701 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm27926-201ENSMUST00000157180 66 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm26101-201ENSMUST00000157246 105 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm25860-201ENSMUST00000158252 126 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm3370-201ENSMUST00000171785 500 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm20399-201ENSMUST00000174652 132 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Gm25535-201ENSMUST00000175364 125 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nedd9O35177 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nedd9O35177 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.71□□□□□ -1.82
Nedd9O35177 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.71□□□□□ -1.82
Nedd9O35177 Gm6842-201ENSMUST00000211361 390 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Mir101b-201ENSMUST00000083622 97 ntBASIC3.71□□□□□ -1.82
Nedd9O35177 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nedd9O35177 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nedd9O35177 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nedd9O35177 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.71□□□□□ -1.82
Nedd9O35177 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nedd9O35177 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nedd9O35177 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nedd9O35177 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nedd9O35177 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Nedd9O35177 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nedd9O35177 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nedd9O35177 Gm24376-201ENSMUST00000104399 127 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm23609-201ENSMUST00000104542 127 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm11456-201ENSMUST00000121070 256 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nedd9O35177 Gm6265-201ENSMUST00000149263 231 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm27510-201ENSMUST00000158214 64 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm25369-201ENSMUST00000158848 132 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm6374-201ENSMUST00000159051 788 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nedd9O35177 Gm24085-201ENSMUST00000175172 116 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Snord92-201ENSMUST00000175548 85 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm20693-201ENSMUST00000177431 211 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm29429-201ENSMUST00000187071 121 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm28534-201ENSMUST00000187744 676 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm43955-201ENSMUST00000204332 142 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm45207-201ENSMUST00000207469 145 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nedd9O35177 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.7□□□□□ -1.82
Nedd9O35177 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 AF357428-201ENSMUST00000083815 69 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nedd9O35177 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nedd9O35177 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nedd9O35177 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.7□□□□□ -1.82
Nedd9O35177 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nedd9O35177 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nedd9O35177 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Nedd9O35177 Gm14581-201ENSMUST00000121726 198 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 Gm27592-201ENSMUST00000157729 126 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 Gm23557-201ENSMUST00000157820 138 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 Gm25519-201ENSMUST00000158392 127 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 Gm22839-201ENSMUST00000158436 304 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.69□□□□□ -1.82
Nedd9O35177 Gm22174-201ENSMUST00000175050 125 ntBASIC3.69□□□□□ -1.82
Nedd9O35177 Gm22692-201ENSMUST00000175055 125 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms